Oncorhynchus masou masou (cherry salmon): 135520362
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Entry
135520362 CDS
T10723
Name
(RefSeq) poliovirus receptor-like isoform X1
KO
K06531
poliovirus receptor-related protein 2
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03266
Virion - Herpesvirus
omm04514
Cell adhesion molecule (CAM) interaction
omm04517
IgSF CAM signaling
omm04520
Adherens junction
omm05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
135520362
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
135520362
04517 IgSF CAM signaling
135520362
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
135520362
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
135520362
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omm04515
]
135520362
04090 CD molecules [BR:
omm04090
]
135520362
Cell adhesion molecules [BR:
omm04515
]
Immunoglobulin superfamily
Nectin family
135520362
CD molecules [BR:
omm04090
]
Proteins
135520362
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2-set_2
ig
V-set
Ig_3
Ig_2
I-set
Ig_PVRIG
TM_ErbB1
DUF6338
DUF4342
Syndecan
Motif
Other DBs
NCBI-GeneID:
135520362
NCBI-ProteinID:
XP_064801925
LinkDB
All DBs
Position
29:complement(67531657..67613491)
Genome browser
AA seq
539 aa
AA seq
DB search
MAREDARNWHDFTKMIGLFSVVTLLTFQGAVSQRVKVEPEVMSYPSQAVNLRCAFADAGG
IQLTQVSWIYEPKEGERLNIAVYHPTFGASYPTSPLKGRVRFTTEPPSLSNPSIQISDVK
MTDEGRYICEYATYPSGNEQGVTSLVMLAKPRNSASGVTVIASTVATGAQPVVVARCESA
DGRPAAQIAWVTAVNGNATTASTEGADNTVTVSSQYMLVPTAADNGKDISCLVSHRTQAK
PESFLMNLAIEYPPQVTILGYDNNWYVGRTNVALTCQATANPVPTTIAWKTMSGQMPDTV
QVKENVLTVLKVDEQINTTFVCEVKNRLGTGKDQVTVMVREPSVVPSNAAVVAGAVIGSL
LALLLVAALIAVLVTRSRRQQQGYRGNPNHSSFDIKSRLFGAGKKGSKNGTGAGAGGNGV
GGNNNSPIYVYKEGSAHDGLTDKANQHVPLHLGGHGEGGVATAPTAQDILLSGELDEAER
RKFAQLEDDEESYDHFGGGGPILQLRPPHDQDGIMSGYLDDDMESQRDGSVISRTAVYV
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggcgagagaagacgctcgaaattggcatgacttcacaaaaatgatcggactgttcagc
gtggtcacgttgctgacttttcaaggggcggtgtctcagcgggtgaaggtggaaccggaa
gtgatgtcctaccccagccaggcggtcaacctgaggtgtgccttcgcagacgctggaggg
atacagctcacacaggtgtcctggatctatgagccgaaggagggcgagcggctcaacatc
gccgtgtaccaccctacctttggggcaagttaccccacatcgcccctgaaggggcgggtc
cgcttcacgacggagcccccctccctcagcaacccctccatccagatctcggacgtcaag
atgactgacgaggggagatacatctgtgaatacgccacctaccccagcggcaacgaacag
ggtgtcacctccctcgtcatgctagccaaacccaggaactctgcctccggggtaacagtg
atagcctccactgtcgccacgggagcccagccagttgtcgtggcccgctgtgagtcggcc
gacggtcgtcctgctgcccagatcgcatgggtgacagctgtcaacggcaacgctaccacc
gcctctacggagggcgctgacaacaccgtgacggtatccagccagtacatgctggttccc
acagcagcagacaacggcaaagacatcagctgtttggtgtcccatcgaacccaggccaag
cctgagagcttcctgatgaacctggccatcgaataccccccacaggtgaccatcctgggc
tatgataataactggtacgtgggtcggaccaacgtggctctgacctgtcaggctactgcc
aaccccgtccctaccaccatcgcatggaaaactatgtccggtcagatgccagacacagtg
caggtaaaagaaaacgtgctgactgtgctaaaggtggacgagcagatcaacacaaccttc
gtctgcgaggtcaagaaccgcctgggcaccggcaaggaccaggtcactgttatggtccga
gaaccctctgtggtcccctccaacgcggccgtggtggcaggtgctgtgattggctccctt
ctggccctcctcctcgtcgccgcccttatcgccgtcctggtcacccggagccgccggcaa
cagcagggttaccgtggcaacccaaaccacagctccttcgacataaagtcgcgtctcttc
ggcgccgggaagaaggggagcaagaatgggacaggtgctggcgctgggggcaacggggtg
ggcggcaacaacaacagccccatctacgtctacaaggagggctccgcccatgatggcctg
actgacaaggccaatcaacatgtgccactgcacctgggggggcatggtgaggggggggtt
gccacggcgcccacggctcaggacatcctgctgagcggcgagctggacgaggcagagcga
aggaagtttgcccagctggaggacgacgaggagagttacgaccactttggagggggcggg
cccatcctgcaactccgcccaccacatgaccaggacggaatcatgagcggttaccttgac
gacgacatggagtctcagcgcgacgggtcggtcatctcacggactgccgtgtacgtgtag
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