KEGG   Oncorhynchus masou masou (cherry salmon): 135520802
Entry
135520802         CDS       T10723                                 
Name
(RefSeq) H-2 class II histocompatibility antigen, E-S beta chain-like isoform X1
  KO
K06752  MHC class II antigen
Organism
omm  Oncorhynchus masou masou (cherry salmon)
Pathway
omm04145  Phagosome
omm04514  Cell adhesion molecules
omm04672  Intestinal immune network for IgA production
omm05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:omm00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    135520802
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    135520802
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    135520802
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    135520802
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:omm04147]
    135520802
Exosome [BR:omm04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   135520802
  Exosomal proteins of epithelial cells
   135520802
  Exosomal proteins of breast milk
   135520802
SSDB
Motif
Pfam: C1-set C2-set_2 Ig_3 C2-set_3
Other DBs
NCBI-GeneID: 135520802
NCBI-ProteinID: XP_064802667
LinkDB
Position
29:83404432..83408371
AA seq 262 aa
MSVLNLSSIHLLLLFSSLSGVDGYFGHFEMRCRFSSEEPRDIEFLLQVYGNKKLLGQYNS
TTEKCTVYTQWMKNFTETACKGPAFLAARRDEMKKYCSSNVPVVYGYLLDKAVEPYIRLR
SVEPFSTRHLAMLVCSAYDFYPKPIRVTWLRDGQEVTSNVTSTEELVNGDWTYQIHSHLE
YTPTPGERITCMVEHFSLTEPKLYDWDPSMPGPEKNKMVIGTCGLLLGVVFIAAGLIFYR
KKSTEGRVLVPTMALPESYGTI
NT seq 789 nt   +upstreamnt  +downstreamnt
atgtctgtgctgaatctctcgtccatccacctattgcttctcttctcctctctgtctgga
gtagatggctattttggacactttgagatgaggtgtcggttcagctccgaggagccccgt
gatattgagtttctgctgcaggtctacggcaacaagaagttactgggacaatacaacagc
acaacagagaaatgtacggtctacacacaatggatgaagaacttcactgaaacggcctgc
aaaggccctgcttttctggccgcgaggagagacgaaatgaagaaatactgcagcagcaac
gttcctgtggtgtatgggtacttactagataaggcagttgagccctacatcaggctgagg
tcagtggagccgttcagtaccagacacctggccatgctcgtgtgcagcgcctacgacttc
taccccaaacccatcagagtgacgtggctgagggacggacaggaagtgacctcaaatgtg
acttccacagaggagctggtcaatggggattggacctaccagatccactcgcacctggag
tacacacccacacctggagagagaatcacctgtatggtggagcacttcagcctcactgag
cccaaactgtatgactgggacccctccatgcctggtcctgagaagaataagatggtgatt
gggacctgtgggctgctgctgggggtggtctttatagcagctggactgatcttctacagg
aagaaatctactgaaggacgagtgttggtgccgaccatggcgctgccagaaagttatggc
accatctag

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