Oncorhynchus masou masou (cherry salmon): 135525670
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Entry
135525670 CDS
T10723
Name
(RefSeq) TNF receptor-associated factor 3-like isoform X1
KO
K03174
TNF receptor-associated factor 3
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04620
Toll-like receptor signaling pathway
omm04621
NOD-like receptor signaling pathway
omm04622
RIG-I-like receptor signaling pathway
omm05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
135525670
04621 NOD-like receptor signaling pathway
135525670
04622 RIG-I-like receptor signaling pathway
135525670
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
135525670
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
TRAF3_RING
zf-C3HC4
zf-C3HC4_2
CCDC39
PEA2_C
Sina_ZnF
NOCA1_mid
CEP89
CALCOCO1
CCDC18_1st
zf-RING_UBOX
FapA
SKAP
Fez1
DUF1664
V_ATPase_I
BLOC1_2
Rod_CreS
YonD_C
AAA_13
DUF7491
ENTR1
Snapin_Pallidin
TolA_bind_tri
Exonuc_VII_L
zf-TRAF_2
Motif
Other DBs
NCBI-GeneID:
135525670
NCBI-ProteinID:
XP_064809504
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All DBs
Position
32:complement(19390785..19404415)
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AA seq
590 aa
AA seq
DB search
MHVRACVCPCPRQVMSAGRNADVRELQIPLQHRSPSLAALSLAQRPWPSDPEAGFLPQHG
GFWDHFIATPEPKYCCEACRLVLCNPRQTECGHRFCETCISEQLSKPNPVCPADLEPLFK
DKIFRDVCCHREIMALRVYCRSEKNGCKEQMSLHQVMDHLNVCPYFEVPCPLGKCKEKMM
RKDIPEHLSWKCKHRETTCEFCMHKMAMTELQKHKETVCPSCPVACPNHCTFPSILRSEL
TSHQHVCPKAHVTCSFIRFGCNFKGLNQDMRDHESSFASEHLRLMATRNTTLEAKMEDVK
GELLERYKVLPGLSSRLSETESQYEEMRENNRQLEQKLTTMQNLMSSHSEKLLEMELELR
SLRTIREEVETLRGTVESIRSRVATLEGGRGGAIPATHTLGSLETQLSRQDDMLSVHEIR
LADMDLRFQVLETASFNGTLIWKIRDYKRRKQEAVASKTLSLYSQPFYTGYFGYKMCARV
YLNGDGMGKGTHLSLFFVVMRGEYDALLLWPFKQKVTLMLMDQGPARKHLGDAFKPDPNS
SSFRRPTAEMNIASGCPLFVAQTVLENGTYIKDDTIFIKVTVDTSDLPDP
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtgcgtgcgtgtgtgtgtccgtgccctcgccaggtcatgtcagcagggcggaat
gcggacgtgcgggagctgcagatccccctccagcatcgctctccctccctggctgctctc
tctctggcccagcgcccctggcccagcgaccccgaggcaggcttcttaccccagcacggg
ggcttctgggaccacttcatagccaccccagagcccaaatactgctgtgaggcctgcagg
ctagtgctctgcaaccccaggcagacagaatgtggacaccgcttctgtgaaacctgcatc
tccgagcagctaagcaaaccaaatccagtatgtccagcagatctggagcctctgttcaaa
gacaagatcttccgtgatgtgtgctgccatagagagatcatggctctgagagtgtactgc
aggagtgagaagaatggctgtaaggagcagatgagtctacatcaggtcatggaccatttg
aatgtgtgtccgtattttgaggtgccatgccctttaggaaagtgcaaagagaagatgatg
cgcaaagacattcctgagcacttgagttggaaatgtaaacacagagagaccacctgtgaa
ttctgcatgcacaagatggccatgactgaattacagaaacacaaagaaaccgtttgtcct
tcatgtccggtggcctgccccaatcattgtacttttccctccatcttacggagcgagctg
acaagtcatcaacatgtgtgccccaaggctcatgtcacctgctcctttatccgctttgga
tgcaatttcaagggtctcaaccaagacatgagggatcatgaatcaagctttgcctctgaa
cacctgcggctgatggcaaccaggaacactacgcttgaggccaagatggaggatgttaaa
ggagagcttctggagcggtacaaggttctgccaggcctaagcagccgtctgtctgaaaca
gagtctcagtacgaggagatgagggagaataacagacagctggagcagaagctcactacc
atgcagaacttgatgagttcccactccgagaagcttttggagatggagctggagctgaga
tctctgaggaccatccgagaggaggtggaaacactacgaggcaccgtggagagcattcgt
tccagggttgcaacgctagagggaggaaggggtggggccatcccagccacacacacacta
ggttctttagagacacagctctcccgtcaggacgacatgctgagtgtccacgagatccgc
ttggccgacatggacctgcgcttccaggtcctagagacggcctccttcaatgggacgctc
atctggaagatccgtgactacaagcggcggaaacaagaagccgtggcgtcaaagaccctg
tctctctacagccagcctttctacactggctactttggctacaagatgtgtgcccgggtc
tacctgaacggagacggcatggggaaaggaacccacctgtctctgttttttgtggtgatg
cgtggcgagtacgatgccctgctgctctggccctttaagcagaaggtgactctgatgctg
atggaccagggcccagccaggaagcacctaggggatgccttcaaaccagaccccaacagc
agcagcttcagacgacccacggcagagatgaacatagcctcgggctgcccgctgtttgtg
gcccagactgtgctggagaacggtacttacatcaaggatgataccatcttcattaaggtc
acagtagacacatctgacctccctgacccttga
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