Oncorhynchus masou masou (cherry salmon): 135525762
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Entry
135525762 CDS
T10723
Symbol
c9orf72
Name
(RefSeq) guanine nucleotide exchange factor C9orf72 homolog isoform X1
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04140
Autophagy - animal
Brite
Membrane trafficking [BR:
omm04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
135525762 (c9orf72)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C9orf72-like
Motif
Other DBs
NCBI-GeneID:
135525762
NCBI-ProteinID:
XP_064809651
LinkDB
All DBs
Position
32:25322083..25342062
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AA seq
503 aa
AA seq
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MTSIFSSYKISIYCSSCIILPARRDLRSTFLVFQPTPRYSNNMSSGPPQSPAVAKTEVTV
EGECPLLAATFAYWDNILGPRVRHIWAPRCEQPLLLSDGEVTFLANHTLNGEILRSAECG
AVDVKFFVLAEKGVIIVSLIFDGELKGDKNTCALSIILPQTELAFYLPLHTVCVERLKHI
IRKGRIWMQKGYNIISVLTSEIVPIMELLSSMKTHSVPEDIDIKDTILNDDDIGDSCHED
FLHKAISSHLQTCGCSMVVGSNPDKVNKIVRTLSLFLTPAERKCSRLCKADSSFKYDTGL
FVQGLLKDSTGSFVLPFRQVLYSPYPTTHIDVDINTVKQMPPCHEHTYNQRLYMRSELST
LWKAASEDDIAPDAVIHTDESFTPNLNIFQDVMHKDTLVKLFIDEVFMLKPGLNLRSTYL
AQFLLILHRKALTLLKYIEDETQKGKKPFRSLRSLKTDLDLMVEGDLNIVMAFAEKLRAG
LHSFVFGKPFYTSVQERDVLMSF
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgacatctattttttcttcctataagatatctatttattgttcaagctgtataattcta
ccagccaggcgtgatctacgttccacctttctggtcttccaacccacccccaggtacagt
aacaacatgtcttctggcccacctcagtcgcccgcagtggctaagacagaggtgactgtc
gaaggagaatgccctctcctcgccgccacctttgcctactgggacaacatcctaggcccg
cgagtgcgccacatctgggctcccaggtgtgagcagccgctgttgctgagtgacggtgaa
gtcaccttcctggccaatcacactctgaacggggagattctgcgcagcgctgagtgtgga
gcggtggacgtcaagttctttgtcctagctgagaagggcgtcatcattgtctctctgatc
tttgacggcgagctgaagggtgacaagaacacgtgtgccctgtccattattcttccacag
acagagctggccttctacctgcccctgcacactgtctgtgtggagaggctcaaacacata
atccgcaagggacgcatctggatgcagaaaggctacaacatcatttctgtgctgacatca
gagattgtccccatcatggagctgctgtcctccatgaagacacacagtgtcccagaggac
atagatatcaaggacaccatcctaaatgatgacgatattggagacagctgccatgaagac
ttcctgcataaggccatcagttctcatctccaaacatgtggctgctccatggtggtcgga
agcaacccagacaaagtcaacaagatagtgcgaacactgagccttttcctcacccctgct
gagaggaagtgctctcggctctgtaaagctgactcctctttcaagtacgacacaggactg
tttgtacaaggcctcctcaaggactccacgggcagcttcgtcttgcccttccgccaggtg
ctgtactcgccctacccgaccacacacatcgacgtggacatcaacacggttaagcagatg
ccaccctgccatgagcacacgtacaaccagcgcctctacatgcgctcggagctcagcaca
ctctggaaggcagccagcgaggatgacatcgcccccgacgctgtcattcacaccgatgag
tccttcacccccaacctaaatatttttcaggatgttatgcataaagacactctggtgaag
ttatttatagatgaggtgttcatgctgaagccaggcctcaatctgcgaagtacttactta
gcccagttcttgctgatccttcacaggaaggctctcacgctactcaaatacattgaagat
gaaacgcaaaagggaaagaagcctttccgctccttgcgcagcttgaagacagacctcgac
ctgatggtggaaggcgacttgaatattgtcatggcttttgctgagaagctgagggctgga
ctgcactcctttgtatttgggaagccattctacaccagtgtacaggagcgagacgtgctc
atgagtttttga
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