Oncorhynchus masou masou (cherry salmon): 135525905
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Entry
135525905 CDS
T10723
Name
(RefSeq) thrombospondin-1-like
KO
K16857
thrombospondin 1
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04115
p53 signaling pathway
omm04145
Phagosome
omm04148
Efferocytosis
omm04350
TGF-beta signaling pathway
omm04510
Focal adhesion
omm04512
ECM-receptor interaction
omm04820
Cytoskeleton in muscle cells
Brite
Membrane trafficking [BR:
omm04131
]
Endocytosis
Phagocytosis
Opsonins
135525905
Glycosaminoglycan binding proteins [BR:
omm00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
135525905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
135525905
NCBI-ProteinID:
XP_064809940
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Position
32:complement(30430401..30442293)
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AA seq
1172 aa
AA seq
DB search
MKLTGVFLLVVLWNCEGSRVAESRDDNSVYDLFELVKVNKRHQGVTLVKGADPYSPAYKI
LNADLIPPVPEISFRDLIDSIQAERGFLLLVNFKQFKKTRGSLLTVERDDGSGPLFEIIS
NGKAQTLDVVYSTGNKQQVVSIEDADLATGHWKNITLFIQEDRAQLFVGCEEINISEMDV
PIQKVLTHEVADIARLRIGKGAVKDRFMGVLQNVRFVFGTTLEAILRNKGCQSSATLTDV
MTLDNPVNGSSPAIRTDYTGHKTKDIQQVCGFSCEDITSMFKELKGLGVIVKQLSNELNR
VNKESTLLMNQMNIHSGVCLHNGIVHKDKDEWTVDDCTECTCQNSATVCRKISCPLMPCA
NATVPDGECCPRCGNPSDYAEDGWSPWSEWTHCSVSCGRGIQQRGRSCDRINSNCEGTSV
QTRDCYPQECDKRFKQDGGWSHWSPWSSCSVTCGEGVITRIRLCNSPTPQMGGRDCQGQG
RETEVCQESPCPINGGWGPWSLWDTCSVTCGGGLQTRQRLCNNPAPKYNGKECQGDTKTS
QLCGKEDCPINGCLSNPCFAGAKCTSFDDGSWKCGSCPVGYTGNGINCKDIDECKEVPDA
CFTLNAVHRCENTEPGYNCLACPPRYSGPQPFGRGVEQATAKKQVCTPRNPCQDGTHDCN
KNANCIYLGQFSDTMFRCECKPGYAGNGHICGDDTDLDGWPNKDLLCVENATYHCKKDNC
PNLPNSGQEDHDKDGLGDACDHDDDNDGIPDDRDNCPMVYNPAQYDVDTDDVGDRCDNCV
HESNPDQVDTDNNGEGDACAIDIDGDGILNERDNCPYVYNVDQRDTDGDGVGDHCDNCPL
EHNPDQIDSDSDRVGDKCDNNQDIDEDGHQNNMDNCPYIPNANQADHDKDGKGDACDHDD
DNDGIPDDKDNCRLAFNPDQLDSDGDGRGDVCKDDFDQDNILDIYDVCPENFAISETDFR
RFQMVPLDPKGTSQIDPNWVVRHQGKELVQTVNCDPGIAVGFDEFNAVDFSGTFFINTDR
DDDYAGFVFGYQSSSRFYVVMWKQITQTYWSHTPTRAQGYSGVSIKVVNSTTGPGEHLRN
ALWHTGDTAGQVRTLWHDPKNIGWKDYTAYRWHLVHRPKSGLIRVVMYEGKRIMADSGNI
YDKTYAGGRLGMYVFSQEMTYFSDLKYECRDS
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgacaggagtctttctccttgtggtgctttggaattgtgagggcagcagggtg
gcagagagtagagatgataacagtgtatacgacctatttgagcttgtgaaagtgaacaaa
aggcaccaaggtgttaccttggtaaaaggcgcagatccttacagcccagcctataagatc
ctgaacgcagacctgatccccccggttcccgagatctccttcagggacctcattgattcg
atacaagctgagaggggattccttctcctggtcaacttcaagcagttcaaaaaaaccagg
ggcagtcttttgactgtggagagggatgacggatcaggaccgttattcgaaataatttcc
aatggcaaggcgcaaactctggatgtggtatactccaccgggaacaagcaacaggtagtg
tccatagaagatgcggatctagcgactggacactggaagaatatcacgctgttcattcag
gaggatcgtgcccagctgttcgtcgggtgtgaagagatcaatatatcagaaatggacgta
cccatccaaaaggttctgacgcatgaggttgccgacattgcccgtctgaggatcggaaaa
ggagctgtgaaagatagatttatgggagtgcttcagaacgtgcgcttcgtttttggaacc
actttggaggcgattttacgcaataagggatgccaaagctctgcaactttgactgatgtc
atgacactggacaacccagtaaatgggtccagcccagcaataaggactgattacactggc
cacaaaaccaaagatattcagcaggtctgtggtttttcctgtgaggatatcaccagcatg
ttcaaggagctcaaggggcttggtgtgattgttaagcagctgtcaaacgagctcaacaga
gtgaataaggagagcactctgctcatgaaccagatgaacatccacagtggggtctgtctt
cacaacggcattgtgcacaaggacaaagatgagtggactgtggacgactgcacagagtgt
acctgccagaactctgccactgtgtgtcgcaaaatctcttgccccctgatgccctgtgcc
aatgccaccgtgcctgatggagagtgttgcccacgttgtggaaacccgagtgactatgct
gaggatggctggtccccctggtctgaatggacccattgttctgtgtcttgtggacggggt
atccagcagcgaggtcgctcctgcgaccgcatcaacagcaactgcgaaggcacttctgtg
cagacccgcgactgctaccctcaggaatgtgacaagcgctttaagcaggatggtggctgg
agtcactggtctccctggtcttcctgctctgtgacatgtggtgagggagtcatcacccgc
atccgcctctgcaactcccccactccccagatgggaggcagagactgccaaggacagggc
cgagagacagaggtctgccaggaatcaccttgtccaattaacggaggctggggaccctgg
tctctgtgggacacctgttctgtcacctgtggaggtggactccagactcgccagcgtctc
tgtaacaaccctgcccccaagtacaatgggaaggaatgtcagggtgacaccaaaacatcc
caattgtgtggcaaagaggactgccctattaatggctgtctgtccaacccgtgctttgct
ggagctaagtgtaccagctttgatgatggttcctggaagtgtggctcatgcccagtgggc
tacaccggaaacggcatcaactgcaaggacatcgacgagtgcaaggaggtccctgatgca
tgcttcacactcaacgcagtccaccgctgtgagaacactgagcctggctacaactgcctt
gcctgcccccctcgctactcaggaccacagccctttgggaggggagtggagcaggccaca
gccaagaaacaagtgtgcacaccccgtaacccctgccaagacggcacccatgattgcaac
aagaatgctaactgtatctacctgggtcagttcagcgacaccatgttccgctgtgagtgc
aaacctggttacgctggcaatggccacatctgtggagatgacaccgacctggatggatgg
cccaacaaagacctcctgtgtgtggagaacgccacctaccactgcaagaaagacaactgt
ccaaaccttcccaactctgggcaggaggaccatgacaaagatgggcttggtgacgcttgc
gatcacgatgatgacaatgatgggatccctgatgatagggacaactgcccaatggtctac
aaccccgctcagtatgatgtggacacagatgacgttggtgatcgctgtgataactgtgtg
catgagagcaaccctgaccaagtcgacacagacaacaacggagagggagatgcctgtgct
attgacattgatggtgatggtattctaaatgagagggacaactgcccctatgtctacaat
gtggaccagagagacactgacggggacggagtgggagaccactgcgacaactgccctctt
gagcacaacccagaccagattgactctgactcagatcgtgtgggagacaagtgcgacaac
aaccaggacattgatgaggacggtcatcagaacaacatggacaactgtccctatatcccc
aacgccaaccaggccgaccacgacaaagatggcaagggtgacgcctgcgaccacgatgac
gacaacgacggtatccctgacgacaaggacaactgcaggctggcctttaaccctgaccag
ctggactctgatggtgatggtcgtggagatgtttgcaaagatgactttgaccaagataat
atacttgatatctacgatgtgtgccctgagaactttgccatcagcgagacggacttccgc
aggttccagatggtaccactggaccccaagggcacctcccagatagaccccaactgggtg
gtccgccaccagggcaaagagctggtgcagactgtcaactgtgaccctggcatcgctgtt
gggttcgatgagtttaacgcagtggacttcagtggaacgttcttcatcaacacagacagg
gatgatgactacgctggctttgtgtttggctaccagtccagctccaggttctatgtggtg
atgtggaagcagatcacacagacctactggtcccacaccccgaccagagctcagggctac
tctggagtgtccatcaaagtagtcaactccaccacaggacctggggagcatctgaggaac
gccctttggcacaccggggacactgctggacaggtacgtactctgtggcacgacccgaag
aacattggctggaaagactacactgcctacagatggcacctggtccacaggcccaagtct
ggactcatcagagttgtgatgtatgaaggcaagagaatcatggcggattctggaaatatc
tacgacaagacttatgctggtggaagactaggcatgtatgtcttctctcaggagatgaca
tacttctcagacctcaaatacgaatgcagagattcataa
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