Oncorhynchus masou masou (cherry salmon): 135526234
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Entry
135526234 CDS
T10723
Name
(RefSeq) platelet-derived growth factor receptor beta-like isoform X1
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04010
MAPK signaling pathway
omm04020
Calcium signaling pathway
omm04510
Focal adhesion
omm04540
Gap junction
omm04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
135526234
04020 Calcium signaling pathway
135526234
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
135526234
04540 Gap junction
135526234
09142 Cell motility
04810 Regulation of actin cytoskeleton
135526234
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
omm01001
]
135526234
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
omm04090
]
135526234
Enzymes [BR:
omm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
135526234
Protein kinases [BR:
omm01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
135526234
CD molecules [BR:
omm04090
]
Proteins
135526234
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
Ig_2
ig
V-set
C2-set_2
ICAM_N
RIFIN
VEGFR-1-like_Ig-like
Ig_VEGFR-1-like_5th
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
135526234
NCBI-ProteinID:
XP_064810484
LinkDB
All DBs
Position
32:complement(55523019..55577349)
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AA seq
1096 aa
AA seq
DB search
MRSVRVCTLHLTTILTALSHFCPEFCCLEISPSNSEVVMTAGDSMIITCSGWGTVEWRFK
RDDNVPYFGVENQNTTSVLILDNVTWSQTGVYVCTEAWTDETIEVAVFVPDPDVWFIESF
HGMVTKTSEEGIIPCVVTNPQINVTLYERDSDMHLKGVYIPSEGFRAPLEDRTYVCRGEL
NGEEKESQAFYVFSIVVPETIEAYINASKTVLKQGESLTVNCTVHGVELVFFSWDYPNRD
VDSIEPLTDVLSSQKMRSRLIVSKVTLANTGQYACHVHEGVQDQRATANVNITILEQGFV
ELRSVQDRNVSAQLHQNVELRVEIEAYPPPRVRWTKDDATVNGDNVVITKQEHETRYVSM
LTLVRIRTEQKGLYTVHVANGDDTKKLTFDLEVKVPPQITDLSDHHLPGKKHAVTCVAEG
VPSPTIQWFSCDSMLKCSNRSTVWQPLVSDPETLSVQTNVSFNESRMVGQVRSQVIFHKP
QQVSVRCEASNERGLRRRDVKLVSSTFFSQVAVLAAVLALVVIVIISIIILIAVWRKKPR
YEIRWKVIESVSLDGHEYIYVDPIHLPYDLAWEMPRDSLVLGRTLGSGAFGRVVEATAYG
LSHSQSSTKVAVKMLKSTARRSETQALMSELKIMSHLGPHLNIVNLLGACTKQGPLYLVT
EYCRYGDLVDYLHKNKHTFLQYYLEKNQEDSGCRISGGSTPLSQRKGYVSFGSECDGGYM
DMSKDEPTVYVPMQELKDTIKYADIQPSPYESPYQHDHYQEQDQITMDPALFISDSTTLS
YTDLIGFSYQVAKGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMHDSNYIS
KGSTFLPLKWMAPESIFHNLYTTLSDVWSYGILLWEIFTLGGTPYPDLPMNELFYSALKR
GYRMAKPNHTTDEVYEVMQKCWDEKHEKRPEFSFLVHTMGNMLTDSYKKRYCQVNDEFFK
SDHPAVVRTKPRLSSPFLTPAITPSTAPDSLQDLNPYPLTGDFRPEADGEEVTTSYNDYI
IPIPDPKPQEEVFSEANRMPMESPASSLILEDDEADSISQETAEADTIPEEEDLHANQAL
IPLESSGTPEVEDSFL
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atgaggagtgtcagagtatgcactctccatctgacaaccattcttacagctctttcacac
ttctgtcctgagttctgttgcctggagatctcccctagcaacagtgaagtcgtcatgaca
gcgggtgactccatgatcattacctgttctggctgggggacggtcgaatggaggttcaag
cgggatgacaacgttccctattttggagtggagaaccagaacacaaccagtgttctcatt
ctggacaatgtgacgtggagccaaacgggagtatatgtctgtactgaggcttggactgac
gagactatagaggtggcagtctttgttccggatcctgatgtgtggttcattgagagtttc
cacggcatggtgaccaagaccagcgaggaggggatcatcccgtgtgtggtcaccaacccc
cagatcaacgtcaccctctacgaaagagacagtgacatgcacctgaagggggtctacatc
ccaagtgagggcttcagggcgccactggaggacaggacctatgtgtgccgaggagagctg
aacggggaggagaaagagtcccaggctttctacgtattcagcattgttgttccggagacg
atcgaggcctacatcaatgcgtctaagacggtgctgaagcagggcgagtctctgaccgtg
aactgcacggtgcacggagtggagctggtcttcttctcctgggactatcccaatagagac
gtggactccattgagcctctgactgacgtcctgtcatcccagaagatgcgctcacgcctc
atagtctccaaggtgacgctggccaacacgggccagtacgcgtgtcatgtccacgagggt
gtccaggaccagagagccacagccaacgtcaacatcaccatccttgagcaaggcttcgtg
gagctgaggtccgtccaggatcgtaatgtctcggcccagctgcaccagaacgtagaactg
agggtggagattgaagcttacccccctccacgtgtccgctggaccaaagatgatgccacg
gtcaacggggacaacgtcgtaatcaccaagcaggagcatgagaccaggtacgtcagcatg
ttgaccctggtgaggatcaggacagaacagaaaggcctctacaccgttcacgtcgccaac
ggcgatgacaccaagaaattgacctttgatctagaggtcaaagtcccccctcagatcaca
gacctgtcggaccaccacctccctgggaagaagcatgcagtgacctgtgtggctgagggg
gtaccttcccccaccatccagtggttcagctgtgacagcatgctcaagtgcagtaaccgg
agcacagtgtggcagcccctagtgtcggaccctgagaccctgagcgtccagaccaacgtc
agcttcaacgagagccgtatggtgggccaggtccgtagccaggtcatcttccacaagccc
cagcaggtgagcgtccgctgcgaggccagcaacgagagaggactccgcaggagggacgtc
aaactggtgtccagcacttttttctcccaggtggcagtgttggctgcggttctagccctg
gtagtcatcgtcatcatctccatcatcatcctcatcgctgtgtggaggaagaagcctcgc
tatgagatcaggtggaaggtgatcgagtcagtgagtctggacggacatgagtacatctat
gttgaccccatccatctgccctatgaccttgcctgggagatgccccgagacagcctggtg
ctgggtcgtactcttgggtccggagcattcggcagggtggtcgaagcgaccgcgtatggt
ctcagtcattcccagtccagcacaaaagtggcagtgaaaatgctcaaatccacggccagg
aggagtgagactcaggctctaatgtctgagctgaagatcatgagccacctggggcctcac
ctcaacattgtcaacctgctgggggcctgcaccaaacagggccctctctacctggtgaca
gagtactgtcgctatggagacctggtggactacttacacaagaacaagcacacgttcctg
cagtactaccttgagaagaaccaggaggactctggctgccgcatctctggagggagcacc
cctctcagccaaaggaaaggctacgtgtcatttggcagtgagtgtgacggtggttacatg
gacatgagtaaggacgagcccacagtgtacgtccccatgcaggagctgaaagacaccatc
aaatatgctgacatccagccttctccctatgagtctccttatcagcacgaccattaccag
gaacaagaccagatcacaatggaccctgccctgttcatcagtgactctactacacttagc
tatactgacctcatcggcttcagctaccaggtggccaaaggcatggagttcctcgcttcc
aagaactgtgtccatcgtgacctggccgccaggaacgtgttgatctgtgaggggaaactg
gtgaagatctgtgactttggcctagccagagacatcatgcatgattccaactacatctcc
aaaggcagcacattcctgcccctgaagtggatggccccagagagtatcttccataacctg
tacactaccctgagtgacgtgtggtcctatggcatcttgctctgggagatcttcaccctt
ggaggaaccccttaccctgaccttcctatgaatgagctgttttacagtgccttaaagaga
ggctatcgcatggccaaacctaaccacaccacagacgaagtttatgaagtgatgcagaag
tgctgggatgagaaacatgagaagaggccagagttctcctttctggtgcacaccatgggg
aacatgctgactgacagctataaaaagagatactgccaagtcaacgacgagttcttcaag
agtgaccacccggctgtggtcagaaccaaacccaggctctcctcccccttcctcacccca
gccatcaccccctccaccgcccctgactccctacaggatctcaacccctaccccctaact
ggagactttagaccggaggcagatggagaggaagtgactacctcctacaatgactacatc
attcccatcccggaccccaagcctcaggaggaagtcttctccgaggccaaccgcatgcca
atggaaagccccgcgagctctctgattctggaggatgacgaggctgattccatctcccag
gagacagccgaggcagacaccattccagaagaggaggatctccatgccaaccaggctctg
attccactggaatcttctggaacaccggaagtggaagacagcttcctgtag
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integrated database retrieval system
