Oncorhynchus masou masou (cherry salmon): 135526838
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Entry
135526838 CDS
T10723
Name
(RefSeq) protocadherin gamma-C5-like
KO
K16497
protocadherin gamma subfamily C
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omm04515
]
135526838
Cell adhesion molecules [BR:
omm04515
]
Cadherins
Protocadherins
135526838
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_FAT4_N
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
135526838
NCBI-ProteinID:
XP_064811584
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All DBs
Position
32:complement(56632759..56635404)
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AA seq
828 aa
AA seq
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MTKRIGYRNWRWLALWWRHFILLWSTIDGQTRYTIPEELKQGSVVGNLAKDLGLGLSEIF
DRKLHVASEAGKQYFNVDAGKGELVVNERIDRETLCGQSASCVLPLQVVIENPLQLHRIE
VEIRDINDNSPNFLTKDRVLKMAELTAVGARFPLESAEDPDVGSNSLKSYILSKDECFSV
KVKDIEGGRKIPELVLEKPLDREIKAVHELLLTALDGGTPARSGTSQITVTVLDNNDNNP
VFQKAVYNVRVNENSEKGTSLIKLEATDSDEGVNGEIEYSFGEHTLESVLSVFDIDAVTG
EMFLRGELDYESAAYYRIDITAVDKGIPEMEGHCRVQVEVTDVNDNAPEIVLTSKPSPVR
EDAPSGTVVALISARDLDSGNNGKVTLQLTKGHPFSLKPSFSDNYALVTSGVLDRESFSE
YNIEITATDSGSPPLNTKKTIPVSIIDVNDNPPKFSQSSYNVYLKENGPPGSMLSSVSTS
DLDFGDNAKISYSILDSKVQDVSVSSYVYINSDNGSIYSMHSFDYEKLKVFQIVVQAKDH
GSPSLSSNATVHVFILDQNDNAPAVIYPSAALGSLSHQKMPGSAKAGHLVTKVTAVDADS
GHNAWISYKLAEATDASLFSVNLYTGEVRTKRAVSEQDDSSQRLLIEIQDDGEPVQSTTV
TLTILVEDGLHEPILDLRQKAPEPSKKNPRITLYLILSLASVSLLSLVTFVIIAVKCVRN
SRSSGSCCMRRDDLDGYKNPNRNLQIQLNTDGPIKYVEVLGGDMLSQSQSFRSCVSPMSE
FSDFTFVKPSSTTDFKEMINVLDASLPDSAWTFESQQVRSDVGLCSVM
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagagaattggataccgaaactggagatggttggctctttggtggcgtcatttc
attctcttgtggagtacaatagacggacagactcgctacaccatcccggaggaactgaaa
cagggctctgtggtaggaaatctagccaaagatctgggtttgggactctctgagattttt
gaccgtaaactgcatgtcgcctctgaggctggcaagcagtatttcaatgtggatgcgggg
aagggcgagctggtcgtcaatgagagaatagacagagagactttatgcggacaaagtgcc
agctgcgttttacctctgcaggttgtcattgagaacccgttacagttgcaccgtattgag
gtggaaatacgagacataaatgacaattctcctaatttcttaacaaaagatcgtgttctg
aaaatggctgaattgacagctgtaggcgcgcgttttccgttggaaagtgcagaggacccc
gatgtgggaagcaattcacttaaatcctacattcttagtaaagacgaatgtttcagtgta
aaagttaaagacattgaaggaggacgaaaaatcccagagctagtgttagagaagccactg
gacagagagataaaagctgtccatgagctattattgactgctctagatggaggcactccg
gctaggtctggaacttcacagatcacggtcactgtccttgataataatgacaataatccc
gtatttcagaaagctgtatataatgtaagggttaatgaaaatagcgaaaagggcacttcc
ttgattaagcttgaggctactgactcagacgagggtgtcaacggggagatagaatattca
ttcggcgaacatacactagagtcagtgttatctgtgtttgatattgatgcagtaacgggg
gaaatgtttctaagaggggaattagattatgagagtgcagcttattatcgtatagacatt
actgctgtagataaaggcatcccagaaatggagggacactgtcgggtacaggtcgaagta
acagacgttaatgacaatgctcccgaaattgtcctcacctccaaacctagtccagtgcgc
gaggacgcaccgagtggcacggtagtggctttgatcagtgcccgagacctagactccggg
aataacggtaaagtaacgttacaacttacaaaaggccatcctttcagtctgaaaccgtca
ttttctgataattatgcactggtcaccagtggtgttttagacagagagagtttctcagag
tataatattgagataacagccactgattcaggctcccctcccctgaataccaagaaaact
ataccagtcagcatcattgatgtcaacgacaacccccctaaattcagccagtcctcatat
aatgtctatttaaaagagaatggaccgccaggctcaatgctctcatcagtatctacatct
gacctggatttcggggataatgccaagatttcctactccatcttagactccaaagtgcag
gacgtgtctgtatcctcctatgtgtacattaactctgacaacggcagtatctacagcatg
cactcgtttgactatgagaaactaaaggtgtttcagattgtggtgcaggccaaggaccac
ggctctccctctctgagcagcaacgccactgtccatgtttttatcctggaccagaacgac
aatgcccccgctgttatttacccctccgctgccctgggctcgctctctcaccagaagatg
cccggctccgctaaagcaggccacttggttactaaggtaacggctgtggacgcagactcg
ggccataacgcctggatttcatataaactggcggaggccacagacgcgtctctgttcagt
gtcaatctttacacgggggaggtgaggactaaacgcgctgtgtccgagcaggacgactcc
tctcagaggctgcttatagagatacaggatgacggggagccggtccagtccaccacggtc
acactgaccatactggtagaggacgggctccatgaacccatcttggaccttcgtcagaaa
gcgccagagcctagcaagaaaaacccgagaatcaccctgtatttgattctctctctggcc
tcggtgtccttgctgtcgctggtgacttttgtcatcatagcagtcaaatgcgttagaaac
agcaggagcagcggtagttgctgcatgagacgggacgacttggacggctacaagaacccc
aacagaaacctgcagattcagctcaacactgacgggccgattaagtacgtggaggtcctg
ggaggggacatgttgtctcagagtcagtccttcaggtcatgtgtctctcccatgtcagag
ttcagtgatttcacctttgttaagcccagcagcaccactgactttaaggagatgatcaac
gtcctagacgcgtctttacccgacagcgcctggacctttgagagccagcaggtgagaagt
gacgtcggtctatgttctgtgatgtag
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