Oncorhynchus masou masou (cherry salmon): 135526839
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Entry
135526839 CDS
T10723
Name
(RefSeq) protocadherin gamma-C5-like
KO
K16497
protocadherin gamma subfamily C
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
135526839
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omm04515
]
135526839
Cell adhesion molecules [BR:
omm04515
]
Cadherins
Protocadherins
135526839
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Ig_CLSTN
Cadherin_FAT4_N
Cadherin_C_2
Ig_Cad99C_N
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
135526839
NCBI-ProteinID:
XP_064811585
LinkDB
All DBs
Position
32:complement(56637722..56640196)
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AA seq
824 aa
AA seq
DB search
MCRGTMWNRLPVWQVLLWWHHFILLWSTIDGQTRYTIPEELKHGSVVGNLAKDLVLGLSE
IYRRKLRITSEAGQQYFSVDLGKGELVVSERIDREELCGQRVPCILPLEVVIEKPLQLHR
VDIEIQDINDNSPSFLTKEKALKIAESINPGARFPLECALDPDVAANTIRSYSINKNDHF
KLNVKNHKDGSKTPELVIERSLDREKQPVHKLILTAVDGGDPVRSGTSEVSIMVLDINDN
APQFERQLYEANVNENAAPGTQILRVKATDPDEGLNGEIEYVFGEQTPDSVTALFDIDSS
TGVIVIKRQLNYEQTSLYKFDIVAKDKGNPEMDGHCDVEFKMIDVNDNIPEIIVTSLTTP
VPEDSPIGTVIALIGAKDSDSGDNGKVRLSVSPKSPFKLNPSVSKHYTLVTNAPLDRERY
SQYSIDISASDSGKPPLSSKKTIIVDVFDVNDNPPLFSQPSYTVYVKENYAPGKLLCSVF
ATDSDLGDNAKTSFSILDSKVQDVSVSSYVYMNPDNGSIYSMHSYDYEKLKVFQILVQAK
DHGSPSLSSNVTVHVFILDQNDNSPAVIYPSAALGSLSHQKMPRSAKAGYLVTKVTAVDA
DSGHNAWISYKLVEATDVSLFSVSLYTGEVRTKRAVSEQDDSSQRLLIEIQDDGEPVQST
TVTLAIQVEDGLHEPILDLRQKTPEPSTKSGRITLYLILSLASVSVLSLVTFVILAVKCV
RNSRSSGSCCMRRDDLDGYKNPNRNLQIQLNTDGPIKYVEVLGGDMLSQSQSFRSCLSPM
SEFSDFTFVKPSSTTDFKEMINVLDASLPDSAWTFESQQVRSDA
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgtgtcgtggaacaatgtggaatagactgcccgtgtggcaggttctgctatggtggcat
catttcattctcttgtggagtacaatagacggacagactcgctacaccatcccggaggaa
ctgaaacatggctctgtggtaggaaatctagccaaagatctggttttgggactatctgag
atttatcgtcgtaaattacgaataacctcggaagctggtcagcagtatttcagtgtggat
ctggggaaaggagagctggtcgtcagtgaaaggatagacagagaggaactgtgtggacaa
agagttccgtgtattttgcctttggaggtagtgattgaaaagcccttgcagcttcaccga
gttgatattgaaatacaggatatcaatgataattctcccagctttctcaccaaagaaaaa
gcattaaagattgcagagtcaataaacccaggcgcaagatttccactcgaatgcgcactg
gatcccgatgtcgctgcgaacactatacgctcatacagcattaacaaaaacgaccatttc
aaattgaatgtcaaaaatcacaaagatggtagcaaaactccagaactggtcattgaaagg
tctctcgaccgggagaagcaacctgttcataagcttattctcaccgctgtagatgggggt
gatccagtgcgttcaggaacctctgaggttagtatcatggtacttgatattaatgataac
gcaccgcagtttgagagacaactttatgaggctaatgttaacgaaaatgctgcacctggc
actcagattttacgagtaaaagcgacagacccggacgagggattaaatggggagatagag
tatgtatttggagaacagacgccagactcagtgactgcattgtttgatatagattcttcg
acaggagtgattgtaataaaaagacaactcaactatgagcagacgagcttatataaattt
gacatagtcgctaaagataaaggcaacccggagatggacggacattgtgatgttgaattt
aaaatgattgacgtcaatgacaacatcccagagataattgtgacgtctctaacgacaccc
gttccagaagattcacctatcggaaccgtgatagctttgataggcgccaaagactccgac
tccggggacaatgggaaggtgcggttaagcgtgtcaccaaagtctccgttcaagttgaac
ccgtcggtatccaagcattacaccctggtaactaatgctcctcttgaccgcgagcgttac
tctcagtatagtatagatatcagtgccagtgattcagggaaaccccctttatccagcaag
aaaacaataattgttgatgtgttcgatgtgaatgacaatccaccgctattctctcagccc
tcgtacacggtgtacgtcaaagagaattacgcaccagggaaactactgtgttcagtcttc
gccacggactcagacctgggggacaacgcaaaaacctccttctccatcttagactccaaa
gtgcaggacgtctctgtatcctcctatgtgtacatgaaccctgacaacggcagcatctac
agcatgcactcatacgactatgagaaactaaaggtgtttcagattctggtgcaggccaag
gatcacggctctccctctctgagcagcaacgtcactgtccacgtttttatcctggaccag
aacgacaattcccctgctgttatttacccctccgctgccctgggctcgctctctcaccag
aagatgccccgctccgctaaagcaggctacctggttactaaggtaacggctgtggacgca
gactcgggccataacgcctggatctcatataaactggtggaggccacagacgtgtctctg
ttcagtgtcagtctttacacaggggaggtgaggactaaacgcgctgtgtccgagcaggac
gactcctctcagaggctgcttatagagatacaggatgacggggagccggtccagtccacc
acggtcacactggccatacaggtagaggacgggctccatgaacccatcttggatctccgg
cagaaaactccagaacccagtacgaaaagcgggagaatcaccctgtatttgattctctct
ctggcctcggtgtccgtgctatcgctggtgacttttgtcatcttagcagtcaagtgcgtt
agaaacagcaggagcagcggtagttgctgcatgagacgggacgacttggacggctacaag
aaccccaacagaaacctgcagattcagctcaacactgacgggccgattaagtacgtggag
gtcctgggaggggacatgttgtctcagagtcagtccttcaggtcatgtctctctcccatg
tcagagttcagtgatttcaccttcgttaagcccagcagcaccaccgactttaaggagatg
atcaacgtcctcgacgcgtctttacccgacagcgcctggacctttgagagccagcaggtg
agaagtgacgcatga
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