KEGG   Oncorhynchus masou masou (cherry salmon): 135530962
Entry
135530962         CDS       T10723                                 
Name
(RefSeq) actin, cytoplasmic 1
  KO
K05692  actin beta/gamma 1
Organism
omm  Oncorhynchus masou masou (cherry salmon)
Pathway
omm03082  ATP-dependent chromatin remodeling
omm04145  Phagosome
omm04210  Apoptosis
omm04510  Focal adhesion
omm04517  IgSF CAM signaling
omm04518  Integrin signaling
omm04519  Cadherin signaling
omm04520  Adherens junction
omm04530  Tight junction
omm04810  Regulation of actin cytoskeleton
omm04814  Motor proteins
omm04820  Cytoskeleton in muscle cells
omm05100  Bacterial invasion of epithelial cells
omm05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:omm00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    135530962
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    135530962
   04518 Integrin signaling
    135530962
   04519 Cadherin signaling
    135530962
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    135530962
  09143 Cell growth and death
   04210 Apoptosis
    135530962
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    135530962
   04520 Adherens junction
    135530962
   04530 Tight junction
    135530962
  09142 Cell motility
   04814 Motor proteins
    135530962
   04820 Cytoskeleton in muscle cells
    135530962
   04810 Regulation of actin cytoskeleton
    135530962
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    135530962
   05100 Bacterial invasion of epithelial cells
    135530962
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:omm03021]
    135530962
   03019 Messenger RNA biogenesis [BR:omm03019]
    135530962
   03036 Chromosome and associated proteins [BR:omm03036]
    135530962
   03029 Mitochondrial biogenesis [BR:omm03029]
    135530962
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:omm04812]
    135530962
   04147 Exosome [BR:omm04147]
    135530962
Transcription machinery [BR:omm03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     135530962
Messenger RNA biogenesis [BR:omm03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     135530962
Chromosome and associated proteins [BR:omm03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TIP60 complex
     135530962
    NuA4 complex
     135530962
  Chromatin remodeling factors
   BAF complex
    135530962
   PBAF complex
    135530962
   GBAF(ncBAF) complex
    135530962
   SWR1 complex
    135530962
Mitochondrial biogenesis [BR:omm03029]
 Mitochondrial quality control factors
  Mitochondrial dynamics
   Actin cytoskeleton organization
    135530962
Cytoskeleton proteins [BR:omm04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actins
    Actins
     135530962
Exosome [BR:omm04147]
 Exosomal proteins
  Proteins found in most exosomes
   135530962
SSDB
Motif
Pfam: Actin
Other DBs
NCBI-GeneID: 135530962
NCBI-ProteinID: XP_064815205
LinkDB
Position
5:2577881..2581937
AA seq 375 aa
MEDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSY
ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS
GGTTMYPGIADRMQKEITSLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
EYDESGPSIVHRKCF
NT seq 1128 nt   +upstreamnt  +downstreamnt
atggaagatgaaatcgccgccctggtcgttgataacggctccggtatgtgcaaggcaggt
ttcgcaggagatgatgctcctcgggctgtgttcccctccatcgtgggtcgccccagacat
cagggagtgatggttgggatgggccagaaggacagctacgtgggagacgaggctcagagc
aagaggggcatcctgactctgaagtaccccatcgagcacggcatcgtcaccaactgggac
gacatggagaagatctggcatcacaccttctacaacgagctgagagtggctccagaggag
caccccgtcctgctcaccgaggcccccctcaaccccaaagccaacagggagaagatgact
cagatcatgtttgagaccttcaacacccctgccatgtacgtggccatccaggccgtgttg
tccctgtacgcctctggccgtaccaccggtatcgtcatggactccggtgacggcgtgacc
cacacagtacccatctacgagggctacgctctgccccacgccatcctgcgtctggatctg
gccggccgcgacctcacagactacctgatgaagatcctgacggagcgcggctacagcttc
accaccacggcagagagggaaatcgtacgagacatcaaggagaagctgtgctacgtggcg
ctggactttgagcaggagatgggcaccgctgcctcctcttcctctctggagaagagctac
gagctgcctgacggacaggtcatcaccatcggcaatgagaggttccgctgcccagaggcc
ctcttccagccctccttcctcggtatggagtcttgcggtatccacgagaccaccttcaac
tccatcatgaagtgtgacgtggacatccgtaaggacctgtacgccaacacggtgctgtcc
ggaggaaccaccatgtaccccggcatcgctgacaggatgcagaaggagatcacctctctg
gccccctccaccatgaagatcaagatcatcgcccccccagagcgtaaatactccgtctgg
atcggaggctccatcttggcttctctctccaccttccagcagatgtggatcagcaagcag
gagtacgacgagtctggtccctccatcgtccaccgtaaatgcttctaa

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