Oncorhynchus masou masou (cherry salmon): 135535021
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Entry
135535021 CDS
T10723
Name
(RefSeq) platelet-derived growth factor subunit A-like
KO
K04359
platelet-derived growth factor subunit A
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04010
MAPK signaling pathway
omm04020
Calcium signaling pathway
omm04510
Focal adhesion
omm04540
Gap junction
omm04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
135535021
04020 Calcium signaling pathway
135535021
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
135535021
04540 Gap junction
135535021
09142 Cell motility
04810 Regulation of actin cytoskeleton
135535021
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
omm04052
]
135535021
00536 Glycosaminoglycan binding proteins [BR:
omm00536
]
135535021
Cytokines and neuropeptides [BR:
omm04052
]
Cytokines
Growth factors (RTK binding)
135535021
Glycosaminoglycan binding proteins [BR:
omm00536
]
Heparan sulfate / Heparin
Growth factors/receptors
135535021
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF_N
PDGF
Motif
Other DBs
NCBI-GeneID:
135535021
NCBI-ProteinID:
XP_064817838
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All DBs
Position
5:16852697..16862974
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AA seq
199 aa
AA seq
DB search
MRAAFLSFLLACLLCLLCTAAEEDPLPRELLERLSRSEIRSISDLQRLLELDLEENEVIG
ENKQRYHNKASPHSYSQLKSSQTHSRHKRSIEEALPAVCKTRTVIYEIPRSQVDPTSANF
IIWPPCVEVKRCTGCCNTSNMHCLPSRKHHRTVKVAKVEYVRRRPKLKEVLVRLEEHLEC
ICTSKRHIKELYDTDNGVR
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgagagccgcttttctgagcttcctcctcgcctgcttattgtgcctgttatgcaccgcc
gctgaggaggacccactcccccgggagctgttggagcggctgtcccgcagtgagatccgc
agcatcagcgacctccagcggctcctggagctagacttggaagagaatgaggtgataggg
gagaacaaacagaggtaccacaacaaggcctccccccacagctactcacagctgaagagc
tctcagacacactccaggcacaagaggagcatcgaggaggcgttacccgcggtgtgtaag
actcgtacggtgatctacgagatccctcggagccaggtggatcccacctccgctaacttc
atcatctggcccccctgtgtagaggtgaagagatgtaccggatgctgcaacactagcaac
atgcactgcctgccctcccgcaagcaccaccgcactgtcaaggtggctaaggtggagtat
gtgaggaggcgtcctaaactgaaggaggtgctggtgcggctggaggagcaccttgagtgc
atatgcacctccaaacgacacatcaaggaactctatgatacagacaatggcgtaaggtga
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