Oncorhynchus masou masou (cherry salmon): 135538764
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Entry
135538764 CDS
T10723
Name
(RefSeq) guanine nucleotide exchange protein smcr8a-like
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
135538764
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omm04131
]
135538764
Membrane trafficking [BR:
omm04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
135538764
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Folliculin
Motif
Other DBs
NCBI-GeneID:
135538764
NCBI-ProteinID:
XP_064820746
LinkDB
All DBs
Position
Unknown
AA seq
1209 aa
AA seq
DB search
MIGAPDVVAFTKEDDFGEVGYPNPWVVPEEFSVPLFPSNNNANPWAKTSYAKFTKDFILI
SEFSEQVGPQPLLTIPDDPKVFGTFDLNYFSLRIMSVDYQASFVGHPTGSGYPRLSFVED
SRVVLGDSKEGAFAYVHHLTLYDLEARGFVRPFCMAYVSADERKIMLQFQELSLRFSRAS
ECLKTGNRRAFARELQRKLHDLEYTRSVLQKEEGLQREAGPQGCYSARAVDKANELAAME
KSIYEHRDLLRQITSYPLRPRRDPHAAHCQHCVTESQRHRDTPPGPDQGEEAGQRRQSYT
PQLIKGKSAKCFAKRLKNLTELCEERFYEATVELLNHTERCFRGDLCYLYTRRLDRALRR
KQNVTNFLFEEELGEEEEEVAVLGRIFCSLNHTVGTDSHMHTPSIVLCPEPPESVEVLEV
NPPCPDNSAQQSEALTGEERLESSLSDLTMETQDQESSEENKDSFSSDRSGGDEEEEGRD
QTPVFLLEEEEGGEGETHRVCEREGEAEGVFNRKREGEAAVLGREEGGAETEEGGAETEE
GGAETEEGGAETEEGGAETEEGDGQRVPDPELLVQMDTACCMSQEGFMYNSSPPDTLPAS
GLQPGSLPLPLVVNQEPQALLPVQGDYGLGSTHCQSPGAGLDLPVSSSGDTTSRGSDQDG
WDCTMSASTGSERAGSPLGYGGLVTLRQKKRTGQGALRFVRQYPFALHALWSLLSGRTLV
VLGSEEGRVRRLVSALALYVPGPGRCGERVQPWLSCPFSLTDLQRWKLIGLQRMASPVGT
SMLCSLSRYSRYISVLDADRKTLRCPGYRGNLLANVADHRTHLRRGSTYFLHLQNVLSGL
ASRAFLLSFTHHLHLPISPLEQRQEVEERTRGFLRDQLRLGEDDCSILMYLSQLITQHYL
DSTSGGAGTTQPHLEKDNTPGTTQQHLDSTSGGAGTTQPHLEKDNTPGTTQQHLDSTSGR
AVTTQPHLEKDNTPGTTQQHLDSTSGRAGTTQPHLEKDNTPGTTQHYLDSTSGRAGTTQP
HLEKDNTPGTTQQHLDSTSGRAGTTQPHLENDSTPGTTQQHLEANNILDPATGGAITPEQ
YLDPTTGGTINPETGLDSTTGGAITPEQYLDSTTGGAITPDQYLDPTTGGAITPEQYLDP
TTGGAITPEQYLDSTTGGAITPEQYLDPTTGGAITPEQYLDPTIHQSATRSRAPPSFTFN
YTTSLLYKI
NT seq
3630 nt
NT seq
+upstream
nt +downstream
nt
atgattggtgccccagacgtggtggcgtttactaaggaggatgattttggggaggtaggg
taccccaacccctgggtggtgccagaggagttttctgtccctctgttcccatcgaataac
aacgccaacccctgggccaagacatcctacgccaagttcacgaaggacttcatcctcata
tcagagttctctgagcaggtgggcccccagcctctgctcaccattcctgacgacccgaag
gtgtttggaacctttgacctcaactacttcagtctgaggatcatgtctgttgactaccag
gcctcgttcgtaggacaccccacgggcagcggatacccacgactcagttttgtggaggac
tcccgggtggtgctgggtgactctaaggagggggcgtttgcctacgttcaccacctgacg
ctctatgacctggaggcccggggcttcgtccgcccgttctgcatggcctacgtctctgcc
gacgagagaaagatcatgctgcagttccaggagctgtcgctccgcttctcccgcgcctcc
gagtgcctgaagaccggtaaccgacgggccttcgcccgcgagctgcagaggaagctacat
gacctggagtacacacggtctgttctgcagaaagaggaggggcttcagcgagaggcgggg
cctcaggggtgttactccgcccgcgcggtggacaaggccaatgagcttgcggcgatggag
aagagtatctacgagcaccgagacctgctgaggcagatcacctcgtaccccctccgcccc
cgccgagacccccacgccgcacactgtcaacactgtgtcaccgagtcacagagacacaga
gacacaccgcctggccccgaccagggggaggaggcgggacagaggaggcagtcctacacc
ccgcagctgataaaggggaagtcggcgaagtgtttcgccaagcgtctgaagaacctgacg
gagttatgcgaggagaggttctacgaggccaccgtggaactactcaaccacacagagcgg
tgtttccggggggacttgtgttacctgtacacccgccgcctggaccgagcgctacgcagg
aagcagaacgtcaccaacttcctgtttgaggaggagctaggggaggaggaagaggaagta
gcggtgctgggaagaatcttctgttctctcaaccacacagtggggacggactctcatatg
cacaccccttccatcgtgctttgccccgagccaccagagtctgtggaggttctggaggtg
aaccctccctgccctgataactctgcccagcagagtgaggccctgaccggggaggagagg
ctggagtcgtcactctctgatctgaccatggagacgcaggaccaggaaagctctgaggag
aataaggacagctttagtagtgacaggagtggaggagacgaggaggaggagggacgggat
cagacccctgtttttctgctggaggaagaggaggggggcgagggtgaaacacaccgtgtg
tgtgagagggagggagaggcagaaggagtgtttaacagaaagagggagggagaagcagca
gtgcttgggagagaggagggaggggctgagacagaggagggaggggctgagacagaggag
ggaggggctgagacagaggagggaggggctgagacagaggagggaggggctgagacagag
gagggtgatggacagagagtgcctgaccctgagttactggtccagatggacacggcctgc
tgcatgtctcaggagggcttcatgtacaactcttctcccccagacacgctgcctgcttct
gggctgcagcccggctctcttccccttcccctggtggtcaaccaggagccccaggccctg
ctgccggtccagggggactacggcctgggttccacccactgccagagccctggggctggg
ctggacctgcccgtctcctcctcgggagataccacctccaggggttcggaccaggacggg
tgggactgtaccatgtcagcgtctacggggtccgaacgggccggctcccctctggggtac
ggggggttggtaacgctgaggcagaagaagaggaccgggcagggagcgctcaggtttgtg
cgtcagtatccgtttgccctgcatgccctgtggtccctgctgagtggtcgaaccctggtg
gtgctgggatctgaggaggggagggtcaggaggctggtgtccgctctggccctctacgtg
cctggacccgggcgctgtggggagagggtccagccctggctctcctgccccttcagcctc
actgacctacagagatggaaactcataggactgcagaggatggcgtctcccgtggggacc
agcatgctctgctctctgtctcgctacagccgttacatctccgtcctggacgccgaccgg
aagaccctccgttgccccggctaccgcgggaacctcctggccaacgtggcggaccaccga
acccatctgcgtcgaggttccacctacttccttcatctccagaacgtgctcagtggactg
gcttcccgggccttcctccttagctttacgcatcacctccaccttcccatcagccccctg
gagcagagacaggaagtggaggagaggacgagaggcttcctgagggatcagctcaggctt
ggggaagatgactgttccatcctgatgtacctgagtcagctgatcacacagcactacctg
gacagtacctcaggaggagctggtactacacaaccccacctggagaaggacaacacgcct
ggaaccacacagcagcacctggacagtacctctggaggagctggtactacacaaccccac
ctggagaaggacaacacgcctggaaccacacagcagcacctggacagtacctcaggaaga
gctgttactacacaaccccacctggagaaggacaacacgcctggaaccacacagcagcac
ctggacagtacctcaggaagagctggtactacacaaccccacctggagaaggacaacacg
cctggaaccacacagcactacctggacagtacctcaggaagagctggtactacacaaccc
cacctggagaaggacaacacgcctggaaccacacagcagcacctggacagtacctcagga
agagctggtactacacaaccccacctggagaatgacagcacgcctggaaccacacagcag
cacctggaagctaacaacatactagaccctgccacagggggcgctataaccccagagcag
tacctagaccctaccactgggggcactataaacccagagacgggtctagactctaccact
gggggcgctataaccccagagcagtacctagactccaccacagggggtgctataacccca
gatcagtacctagaccctaccactgggggcgctataaccccagagcagtacctagaccct
accactgggggtgctataaccccagagcagtacctagactccaccactgggggcgcgata
accccagagcagtacctagatcctaccactgggggcgctataaccccagagcagtaccta
gaccctaccatccatcagtctgctactaggagcagagctccacccagcttcacctttaac
tacaccaccagtctcctatacaagatctga
DBGET
integrated database retrieval system