Oncorhynchus masou masou (cherry salmon): 135540111
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Entry
135540111 CDS
T10723
Name
(RefSeq) polyhomeotic-like protein 2 isoform X1
KO
K11457
polyhomeotic-like protein 2
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
135540111
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
omm03036
]
135540111
Chromosome and associated proteins [BR:
omm03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
135540111
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHC2_SAM_assoc
SAM_1
SAM_2
zf-FCS_1
eIF-5_eIF-2B
DUF7608
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
135540111
NCBI-ProteinID:
XP_064822563
LinkDB
All DBs
Position
5:65623055..65667586
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AA seq
906 aa
AA seq
DB search
MGHHTPAARWGAQRRFRRACPKGSRGRVKRGEGTMDIEQGPPASSTSSTGATATSTSTTS
SSTTTNSTGRQAVPQISVYSGIPDRQTVQVNFRVIQQALHRQPNTAAQYLQQMYAAQQQH
LMLQTAALQQQHLSNAQLQSLAAVQQASIAAGRQSSTQNGTSSQQTGSSQATVSAINLTT
SPAAAQLISRTQSVSSAPAGSISQQAVLLGSTSSPTTLTASQAHMYLRAQMAQQSNLVQV
ARSLGRAVPLSPQLIFTPTATVTAVQSESSTQSSGQQSAPSQVQNLAIRSQQGATMSSFQ
THNLQALSLKQTPVAIQPSPLLKNPSQGSRGSGGKGSSSDVPLDGSKKGESIVTEVCAIN
MSRSITALSGQPLSTPAYTQIHPSHSLVQQHKQQQFVIQQTHASQRTQGQLLQTASIQPH
LQTPSVVPQSTSQAGPVPVLPKPASHHQPSTPSQQATIFHSTISPHALHSSLSQTKAQPV
QLTAINLQIQPALSQASRLVQDSKGQEKPKSLVVRELCPTPSVEQQPTPFTPSAPSPPQA
TKPAEQPKTDPVMPISQPQGVPTTKRLNAAPETPPPAMTSGNENEAPTVTGSTPQNGENK
PPQAIVKPQVLTHVIEGFVIQEGAEPFPIERLPVMMDSPKKLHEQLSSDPDKTPVSNPTN
TTDSETEELTPQELKDQEDSDAPKLRCEFCGWVDFAYKFKGSKRFCSMVCAKRYNVGCTK
RIGLFRPERSKASNRWRRRSHNSCRQSVEPKKQKLSPTPQQTQGGSVSSPLPSQPSQEES
SPFSDMSSYEEPPSPLSGASSGPTAPQALSHQAGRGSDQEAPRGRELPLLTQHFLPNDST
KWNVEEVYDFIHSLPGCQEIADEFRSQEIDGQAMLLLKEDHLMSAMNIKLGPALKIYAHI
NMLKDS
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atggggcatcacactcccgcagcacgctggggggcccagaggaggttcaggagagcttgt
ccaaagggcagcaggggaagggtcaaacgaggagagggcaccatggacattgagcagggg
cctccagcctctagtaccagcagcactggagccactgccaccagtaccagtacgaccagt
agcagcactaccaccaacagcacaggaaggcaggctgtgcctcagatctctgtgtacagc
gggattcctgacaggcagacggttcaggtaaacttcagggtgatccagcaggcattgcac
cgccagcccaacacggctgcgcagtacctgcagcagatgtacgcagcgcagcagcagcac
ctcatgctgcagacagcagccctccagcagcagcacctgagcaatgcacagctccagagc
ctagccgccgtacagcaggccagtattgcggcaggaaggcagagctccacccaaaatggc
acttcatcccagcaaacaggatcatcccaggccacagtgagtgcaattaacctgaccacg
tccccggctgcagcccagctgatcagccgaacccagagtgttagctccgccccagccggc
agcatctcccagcaggccgtgctcctgggcagcacgtccagccccaccaccctcactgcc
agtcaggctcatatgtacctgcgtgcccagatggcacagcaaagcaaccttgtgcaagta
gctaggagcctaggccgtgctgttcctttgtccccccagctcatcttcacacctacggcc
acagtgactgcagtccagtctgagagctccacgcagtcctctggacaacagtctgccccc
tcacaggtccagaacctggctatccgtagccagcagggggcgaccatgtcctcctttcaa
acacacaacctccaggccctcagcctaaagcagacccctgtcgccatccagccctctccc
ctgctcaaaaaccccagccaggggagccggggctctggggggaagggcagctcatccgac
gtccccttagatgggagcaagaagggggagagcattgtgacggaggtgtgcgctataaac
atgagtcgcagcatcacagctttgagtggccagcctctcagcactccagcatacacccag
atacacccttcccactccctggtccagcagcataagcaacagcagtttgtgatccagcag
acccatgcttcccagaggacccagggacagctactgcagactgcctccatccaaccccac
ctgcagactccctccgtggtcccccagtccaccagccaggcaggccctgtccctgtgctg
cccaagcctgcctctcaccaccagccctctacacccagccagcaggcaaccatcttccac
tccaccatcagcccacatgctctccactccagcctgagccagaccaaagcccagccagtg
caactcacagccatcaacctccagatacaaccagcgctctcacaggcttctcgattggtc
caggacagtaaaggacaggagaagccaaagtcattggtggtcagggagctctgcccaact
cccagtgtagagcagcagcccaccccatttaccccctctgccccgtctccaccacaagcc
accaagccagcagagcagcccaagactgacccagttatgcccatcagccaaccacaagga
gtccctactaccaagaggttgaatgctgcacctgagacgccacccccagccatgacatca
ggaaatgagaacgaggcacccactgtgaccggcagcaccccccagaatggagagaacaag
ccaccccaggccatcgtcaagccccaggtcctcacccacgtcattgagggctttgtcatc
caggagggtgctgaacccttccctattgagcggttgcctgtaatgatggacagcccaaag
aagctgcatgagcagctctcctctgacccagacaagacccctgttagtaaccccaccaac
accacagactctgagacagaggagctgacccctcaagaattaaaagaccaagaggattca
gatgcccccaaactgagatgtgaattctgtggctgggtggactttgcctacaaattcaag
gggtcaaaacggttctgttccatggtgtgtgcgaaaaggtataatgttgggtgcactaag
cggataggcctcttccgtccagagaggagcaaagcatccaaccgctggcgcagaaggtca
cacaacagctgccgccagagtgtcgaacctaagaagcagaagctttcccctacacctcag
cagactcagggaggttcagtgtcctccccgctcccctcccaacccagccaggaggagtcc
agccccttctcagacatgtccagctatgaggagcctccgtcacccctgtcaggagccagc
tcaggtcccacagcaccccaggcgttgtcacaccaggcagggagaggctcagaccaagag
gccccccgaggcagagagctgccactcctcactcagcacttcctgccgaacgactccacc
aagtggaatgtagaagaagtctacgattttatccactcccttccaggctgccaggagata
gcagatgagttccgctcgcaggagatagatggacaggccatgctcctactgaaagaggac
caccttatgagtgccatgaatattaaactgggacctgcacttaagatctacgcacacatc
aacatgctcaaagactcttag
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