Oncorhynchus masou masou (cherry salmon): 135544161
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Entry
135544161 CDS
T10723
Symbol
traf2a
Name
(RefSeq) TNF receptor-associated factor 2 isoform X1
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04010
MAPK signaling pathway
omm04137
Mitophagy - animal
omm04141
Protein processing in endoplasmic reticulum
omm04210
Apoptosis
omm04217
Necroptosis
omm04621
NOD-like receptor signaling pathway
omm04622
RIG-I-like receptor signaling pathway
omm04920
Adipocytokine signaling pathway
omm05132
Salmonella infection
omm05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
135544161 (traf2a)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
135544161 (traf2a)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
135544161 (traf2a)
09143 Cell growth and death
04210 Apoptosis
135544161 (traf2a)
04217 Necroptosis
135544161 (traf2a)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
135544161 (traf2a)
04622 RIG-I-like receptor signaling pathway
135544161 (traf2a)
09152 Endocrine system
04920 Adipocytokine signaling pathway
135544161 (traf2a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
135544161 (traf2a)
09171 Infectious disease: bacterial
05132 Salmonella infection
135544161 (traf2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omm03019
]
135544161 (traf2a)
04121 Ubiquitin system [BR:
omm04121
]
135544161 (traf2a)
Enzymes [BR:
omm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135544161 (traf2a)
Messenger RNA biogenesis [BR:
omm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
135544161 (traf2a)
Ubiquitin system [BR:
omm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
135544161 (traf2a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF_BIRC3_bd
zf-TRAF
TRAF2_zf
TRAF3_RING
zf-C3HC4
zf-RING_4
zf-C3HC4_2
zf-C3HC4_4
Sina_ZnF
zf-RING_6
zf-RING_5
Zn_ribbon_ACC
ATG16
MATH
EFL1
Motif
Other DBs
NCBI-GeneID:
135544161
NCBI-ProteinID:
XP_064827653
LinkDB
All DBs
Position
1:40300653..40314332
Genome browser
AA seq
576 aa
AA seq
DB search
MAAQEPSPPSSLEGNKPGFPKKILANNLEEKHMCNSCLKILRRPLQAQCGHRFCSFCFNK
IVSSGPHKCSACIKEDLFEDPTSILKEGGAFPDNAARREVEALAAVCPNEGCTWTGNIKE
YEVNHEGKCDFMIILCPSCKELMRTNELERHNERECPERTLNCKYCKEPFHFKNIKAHDE
ICPKYPMICEGCAKKKIPREKYVDHIKFCSKFRAPCRFHVVGCDMSVEKEKTHDHERACS
YEHLNLLLHFIMGIKVSLESLQPQSLELAGHKIHELHRALRELELKLGQLTLGGGAPVQG
ACAPTLPTLALPALATSFTPLPSAVGAALELQLHSEKTKVEELSRRCQELELKVGTFENI
VCVLNREMERSSTTIEAYNRQHRLDQDKVEILNNKVRQLERTVGLRDLSIVEMEGNIREM
SAATFDGIFVWKISDFTKKRQDAIAGRAPAMFSPAFFTSKYGYKMCLRIYLNGDGTGRAS
HLSLFFVVMRGHSDALLKWPFNQKVTLMLLDQNNREHIIDAFRPDISSSSFQRPVSDMNI
ASGCPLFCPLPKLDTKNSYIRDDTIFIKAIVDLTGL
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atggctgcacaagagccatcaccaccatcttcactggaaggcaacaaaccaggattccct
aagaaaattttggcgaacaacctcgaagaaaaacacatgtgcaattcctgtttgaaaata
ttgagaaggcctctacaagcccaatgtggccatcgtttttgttcattctgtttcaacaaa
attgttagttctggaccacataaatgcagtgcttgcatcaaagaggacttgtttgaggac
cccacatctattcttaaagaaggcggtgcttttcctgacaatgcagcgcggagagaagtg
gaagcattggcagctgtttgtccaaatgaaggatgcacttggacgggaaatatcaaagaa
tatgaggtgaaccacgagggaaagtgtgacttcatgatcattctttgtccctcctgtaaa
gaactcatgagaaccaatgagctggagcgccacaacgaacgagaatgtcctgagaggact
ttaaactgcaaatactgcaaagaacctttccatttcaagaacatcaaggctcatgatgag
atctgtccaaagtaccctatgatttgtgaaggctgcgcaaagaaaaagattcccagagaa
aagtatgtggaccacatcaagttctgcagtaaattcagagcaccttgcagatttcacgtc
gttggctgtgatatgtctgtggagaaggagaagacccatgaccatgagcgtgcatgttcc
tacgaacacttaaatctactcttgcatttcatcatgggcatcaaggtgagcctggagagc
ttgcagccccagagcctggagctcgcaggtcacaagatccacgagctgcaccgggccttg
agagagctggagctgaagctgggacagctgactctgggtgggggagcccccgtgcaggga
gcctgtgcccctaccctccctaccctggccctccctgccctggccacctcctttaccccc
ctgcccagtgcggtgggcgccgccctggagctgcagctccacagtgagaagaccaaggtg
gaagagctgagccggcggtgccaggaactggagctgaaagtgggcaccttcgagaacatt
gtctgtgtcctcaaccgagagatggagcgctcctccaccaccatcgaggcctacaaccgc
cagcatcgcctggaccaggacaaggttgagatcctcaataacaaggtgcgtcagctggag
agaactgtgggcctgagagacctgtccattgtggagatggaggggaatattcgggaaatg
tctgcagctacgtttgatggtatctttgtctggaaaatctccgatttcacaaagaaaaga
caggatgctattgctggcagagccccagctatgttctccccagcatttttcaccagcaaa
tatggctacaagatgtgcctacggatttatctgaatggggacgggacgggacgggccagt
cacttgtctctgttcttcgtggtgatgaggggacacagtgacgccctcctcaagtggccc
ttcaaccagaaggtgaccctgatgctgctggatcagaataaccgagagcacatcatcgat
gccttccgtcccgacatctcctcctcctccttccagaggcccgtcagtgacatgaacatc
gccagcggctgcccactcttctgccctcttcccaaactggacaccaaaaactcctacata
cgagatgatactatattcatcaaggctattgttgacctcactggcctctag
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