Oncorhynchus masou masou (cherry salmon): 135544652
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Entry
135544652 CDS
T10723
Name
(RefSeq) TNF receptor-associated factor 2-like
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04010
MAPK signaling pathway
omm04137
Mitophagy - animal
omm04141
Protein processing in endoplasmic reticulum
omm04210
Apoptosis
omm04217
Necroptosis
omm04621
NOD-like receptor signaling pathway
omm04622
RIG-I-like receptor signaling pathway
omm04920
Adipocytokine signaling pathway
omm05132
Salmonella infection
omm05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
135544652
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
135544652
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
135544652
09143 Cell growth and death
04210 Apoptosis
135544652
04217 Necroptosis
135544652
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
135544652
04622 RIG-I-like receptor signaling pathway
135544652
09152 Endocrine system
04920 Adipocytokine signaling pathway
135544652
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
135544652
09171 Infectious disease: bacterial
05132 Salmonella infection
135544652
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omm03019
]
135544652
04121 Ubiquitin system [BR:
omm04121
]
135544652
Enzymes [BR:
omm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135544652
Messenger RNA biogenesis [BR:
omm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
135544652
Ubiquitin system [BR:
omm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
135544652
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF_BIRC3_bd
zf-TRAF
TRAF2_zf
TRAF3_RING
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_4
SlyX
Sina_ZnF
CRWN_N
DUF4795
Plectin_PPL
Motif
Other DBs
NCBI-GeneID:
135544652
NCBI-ProteinID:
XP_064828503
LinkDB
All DBs
Position
8:39089262..39104617
Genome browser
AA seq
594 aa
AA seq
DB search
MATQEPSPPSSMESNKPGFPKKILANKLEDKHLCNCCHNLLRRPFQAQCGHRFCSYCFNM
TIRDGPQKCNACIKEDIFEEPTSILKQGCAFPDNAARREVENLSAVCINEGCTWKGNIKE
YELSHEEKCEFMIIPCPSCKERIRFNEQERHNERECPERTLNCKYCKEPFHFKNIKAHDE
ICPKYPMICEGCAKKKIPREKYVDHIKFCSKFRTPCRFHVVGCDMSVEKERIHDHERACA
YEHLNLLLHYIMGMKVSMEGLQPQGLELAGHKLLDLHRSLRELEVRVSQISTTSIGPPVQ
GVTSSSSLGLPGPPTPALPLPPPPAPVPTLTVSTSFTPLPSSVGAALELQLHSEKTKVAE
LGRRCTDLEVKVGTFENVVCVLNREVERFTTTMEAGNRQHRLDQDKIEALSNKVRQLERT
VGLKDLTVAEMEGRLREMSATTFDGVFVWRISDFTKKRQDAIAGRAPAMFSPAFYTSKYG
YKMCLRIYLNGDGTGRGSHLSLFFVVMRGLSDALLKWPFNQKVTLMLLDQSSREHIIDAF
RPDITSSSFQRPVSEMNIASGCPLFCPLSKLDAKNSYIRDDIIFIKAIVDLTGL
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggccacgcaagaaccatcccctccatcgtccatggagagcaacaaacccggcttcccc
aagaagatcctggccaataagctggaggataagcacctgtgtaactgctgtcacaacctg
ctgcggaggcccttccaagcccagtgtggacaccgcttctgttcctactgcttcaatatg
actatcagagatggacctcagaaatgcaatgcttgtatcaaagaggacatttttgaagag
cccacgtcaattctaaaacaaggctgcgcttttcctgacaacgcagctcgaagagaggtc
gaaaacctctctgctgtctgcatcaacgaaggttgcacttggaaaggcaatattaaagaa
tacgagttgagccacgaagagaagtgtgagttcatgatcattccctgcccttcctgtaaa
gagcggatccgcttcaacgaacaggaacgccacaacgagcgagagtgccctgagagaacc
ctcaactgcaagtactgcaaggaaccatttcatttcaaaaacatcaaggcccacgacgag
atctgccccaagtaccccatgatctgtgaaggctgcgccaagaagaaaatccccagggag
aagtatgtggaccacattaagttctgcagcaagttcagaacgccgtgcagattccatgtt
gttgggtgtgatatgtcagtggagaaggagaggatccacgaccacgagagggcctgcgct
tacgagcacctcaacctgctgctacactacattatgggcatgaaggtgagcatggagggc
ctgcagccgcagggactggagctcgccggacacaagctcctggacctccaccgttccctc
agggagctggaggtccgtgtctcccagatcagcaccacctcgatcgggcctcccgtgcag
ggggtcacctcctcttcctctttaggtctcccggggcctcctaccccggctcttcctctg
cctccacctcccgccccggtcccaaccctgaccgtgtccacctccttcacccccctgcct
agctcggtgggggcggccctggagctgcagctccacagtgagaagaccaaggtggcggag
ctgggacgcaggtgcactgacctggaggtgaaggtggggacgtttgagaatgtggtgtgt
gtgttgaaccgagaggtagaacgcttcaccaccaccatggaggcaggtaacagacagcat
cgactggaccaggataagattgaggccctgagcaacaaggtgcggcagctggagaggacg
gtgggactgaaggacctgacggtagcggagatggagggcaggctgagagagatgtcggcc
accacattcgacggcgtcttcgtctggaggatctctgacttcaccaagaagagacaggac
gccatcgctggccgagcccccgccatgttctcaccagcattctacaccagtaaatacggc
tataagatgtgtctgcggatctacctgaatggggacggcacagggcgtggcagtcacctt
tcccttttctttgtggtgatgagaggactgagtgatgctctgctaaaatggccctttaac
cagaaggtgactctgatgctgctggaccagagtagcagggagcacatcatcgacgccttc
cggcctgacatcacttcctcctccttccagaggcctgtgagcgagatgaacatcgccagc
ggctgcccgctgttctgcccgctctcaaagcttgacgccaagaactcctacatccgcgac
gacataatcttcatcaaggccattgtggatctcacaggcctttag
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