Oncorhynchus masou masou (cherry salmon): 135545650
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Entry
135545650 CDS
T10723
Symbol
ptcd3
Name
(RefSeq) small ribosomal subunit protein mS39
KO
K17659
pentatricopeptide repeat domain-containing protein 3
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
omm03029
]
135545650 (ptcd3)
Mitochondrial biogenesis [BR:
omm03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
135545650 (ptcd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rib_mS39_PPR
PPR_2
PPR_3
PPR_long
TPR_24
PPR_1
SMC_ScpB
Motif
Other DBs
NCBI-GeneID:
135545650
NCBI-ProteinID:
XP_064829484
LinkDB
All DBs
Position
9:complement(19327213..19334916)
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AA seq
671 aa
AA seq
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MAAPGKHVGHYIYKNGRFLQSHFEQFCFRRNFGWSVVVCQQNASTERESAEAIVIPKKKT
WSKWAVLQALASTVNRDPTAPHYMFQDDPYLTPRTSAEFKLYSLSQESGRMAANHIVNKN
PKFFQKDFAEPHIPCLMPETMELCIEEVSEAALLERIMLRKVKAAVDMYDQLLQTGTTVS
PDASNDLLDLICLYGDRDPVQDDKPEAEDVAQEVQEEGRRRKGRLRRASDLVRIVWRENN
NAERIFNLLPERDTRAYSALIRGMVKYGAHVKAFNTYTDMLNNRLTADVHTFNALISAAP
EVRERYNEKWDLIVDLLNQMNEQKVKPNLLTFNALLKALRRCGSLARAQSLHTLSEMKAM
GIAPSLASFDHVLGIFYKAASPSQGQTDILQEVMTEVAGRTFVAQDPDDVNFFSSAMRIC
LDTKDIEAAYKVHDLLSVGENWRMLGDSFQQSIYYGRMFNLLCMMEHIDVVLKWYKELIP
SLYYPNPQGMRDLLQALDTDNRLDMIPQIWKDIRRMGHDNKSDLVDELLSLMARDKHSPE
IQESFAVCALDVKSLYEQGQGARMALEWTATAMTNITSVLLAAQKKQQAWDMLKLFKTKN
RVPSEELMEEFLVSIKSSNDPQHAMELVQISASFCLPSTPKLAERVLQAFELSEEQKTIL
SELEVSTEVSE
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggcggcccccggtaaacacgtagggcattacatttacaagaatggtcgctttcttcaa
agtcattttgaacaattctgttttcggaggaactttggatggagtgtagtcgtttgtcaa
caaaatgcatcaactgaaagagagtctgcagaggcaattgtcattcccaaaaagaaaacg
tggagcaaatgggctgtgctgcaggctcttgcatccacagtcaacagggaccccactgca
ccacattacatgttccaggatgatccttatcttactccaaggacgtctgcagagtttaaa
ttatactccctctcccaggagtctggcagaatggcagcaaaccatattgtcaacaaaaac
ccgaagttcttccagaaagactttgctgaaccacatattccatgcttaatgccagagacc
atggagctgtgtattgaggaagtgagtgaggcagcgctgctggagcgcatcatgctgagg
aaggtgaaggctgcagtagacatgtacgatcagctgctacagacaggcaccactgtgtct
cctgatgcttcgaatgacctgctggaccttatttgtctctatggagatcgtgaccctgtg
caagatgacaagccagaggcagaagatgtggctcaggaggtgcaggaggagggcaggagg
aggaaagggaggctgcggagagcctccgacttagtgaggatagtttggagggagaacaac
aatgcagagaggatctttaaccttcttccagaacgtgacacacgagcatactctgctttg
atcagaggcatggtgaagtatggagctcatgtgaaggcattcaatacatacacagacatg
ctgaacaacagactgactgcggatgtccacaccttcaatgctctgatctctgcggcacca
gaagtccgggagaggtacaatgagaaatgggacctgattgttgacttactaaatcagatg
aatgagcagaaggtgaagcccaatctgctgacgtttaatgctttgctgaaggcccttcgt
cgctgtggctccttagccagggctcagtctctgcacacgctcagtgagatgaaggctatg
ggcattgcacccagtttggcttcttttgaccatgttctgggcattttctacaaagcagca
tctccttcccaagggcagactgatatcctacaggaagtgatgactgaggtggcaggaagg
acattcgttgctcaggatccagatgatgtaaactttttctccagtgccatgagaatttgt
ctggataccaaggacattgaggcagcgtacaaggtgcatgacctgctcagtgtgggagag
aactggaggatgctgggagattccttccaacagagtatctattatggcagaatgttcaac
ctgctctgcatgatggaacatatagatgtggtgctgaagtggtacaaagaactgattcct
tctctctattaccccaatccacaaggaatgagagatctgctccaggcactggacactgat
aacagattggacatgatcccacagatatggaaagacatccgacggatggggcatgacaac
aagtccgatttagtggatgagctgctgtcactcatggccagggacaagcacagccctgag
atccaggagtcttttgcagtgtgtgcgctggatgttaagagcctgtatgagcaggggcaa
ggagccaggatggctttggagtggacagccactgccatgaccaacatcacctctgtccta
ctggcagctcagaagaagcagcaggcatgggatatgttgaagctcttcaagaccaaaaac
agagttccatctgaggagctgatggaggagttcctggtcagcatcaagagcagcaacgac
cctcagcacgccatggagctggtacagatctcagctagcttctgtctccccagcaccccc
aagctggctgagagggtactgcaggcgtttgagctctctgaagaacagaagactattctg
tccgagctggaggtctcaactgaagtcagcgagtaa
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