Oncorhynchus masou masou (cherry salmon): 135546013
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Entry
135546013 CDS
T10723
Name
(RefSeq) short transient receptor potential channel 3-like isoform X1
KO
K04966
transient receptor potential cation channel subfamily C member 3
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
omm04040
]
135546013
Ion channels [BR:
omm04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
135546013
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GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Ank_4
Ank_5
YVC1_C
Motif
Other DBs
NCBI-GeneID:
135546013
NCBI-ProteinID:
XP_064830140
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Position
9:43025221..43107252
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AA seq
889 aa
AA seq
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MFAKVKALHRGSNHDVVFSVSARKRAADLELPAQRRMTGAREKGRRPAMRGPAFMFNDHT
TSMTAEEERFLDAAEYGNIPVVRKMLEESTTLNVNCVDYMGQNALQLAVGNEHLEVMELL
LRRDNLARIGDALLLAISKGYVRIVEAILAHPSFQASERLTRSPCELQDDDFYSYDEDGT
RFSPDITPIILAAHCQKYEVVHMLLLKGARIERPHDYFCKCPECTEKQGKDAFSHSRLRI
NAYRGLASPAYLSLSSEDPVLTALELSNELTKLANIEKEFKDKKSHKKETMQHNCFSLND
YRKLSMQCKDFVVGVLDLCRDTEEVEAILNGDVTAEKEAGKGLRSLLSRVKLAIKYEVKK
FVAHPNCQQQLLTIWYENLSGLREQTIAVKCLVVVAVAFGLPLLAMGYWFAPCSRLGNVL
RSPFMKFVAHAASFIIFLCLLLFNASDRFQGISTMPNVTVTDHPMQIYRVKTTEFSWTEM
LIMVWVTGMMWSECKELWTEGPREYMQQLWNVLDFGMLSIFIAAFTARFFAFLQATRAQQ
YVNEKIHTTDLSLVTLPPEVKYFTYARDKWLPSDPQLISEGLYAIAVVLSFTRIAYILPA
NESFGPLQISLGRTVKDIFKFMVLFIMVFLAFMIGMFILYSYYLGAKVNPAFTTVEESFK
TLFWSIFGLSEVSSVVLKYNHKFIENIGYVLYGIYNVTMVVVLLNMLIAMINSSYQEIED
DADVEWKFARSKLWLSYFDNGKTLPPPFSIVPTPKSFYHHIRWIVGMLHCRQRSVKKDLE
LGLDSSKSRLNLFTQSNLRIAESHSILNQPTCYQQIMKRLIKRYVLKAQVDKENDEVNEG
ELKEIKQDISSLRYELLEDKSQATEELSLLIQKLSDKLNLGPTTRLPYK
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcaaaagtcaaggctcttcacagaggaagtaaccatgatgttgttttctccgtc
tctgcaaggaaaagggcggcggaccttgagctccccgcccagcggcggatgacaggggcg
cgggagaagggtcgtcgaccagcgatgcgtgggccggccttcatgttcaacgaccacacc
accagcatgaccgccgaggaggagcgctttctggatgccgccgagtatggcaacatccct
gtggtccgcaagatgctggaggagtccaccacgctcaatgtcaactgtgtggactacatg
ggccagaacgcattgcagcttgcggtgggcaacgagcatctggaggtgatggaactgctc
ttgcggagggacaacctggcacgcatcggtgacgccttactcctggctatctcaaaaggg
tatgttaggatcgtggaagccatcttggcccatccatccttccaagccagtgagcggctg
acgcggagtccgtgtgagctgcaggacgatgacttctactcgtatgacgaggatggcaca
cgcttctcgcccgacatcacccccatcattctggctgcacactgccagaagtacgaggtg
gtacacatgctgctgttgaagggcgctcgcattgagcggccacatgactacttttgcaag
tgtccagaatgcaccgagaaacagggcaaagacgctttcagccactcacgtttgcgcatc
aatgcctaccggggcctggctagcccggcgtacctttcgctgtctagcgaggacccggtg
ctcaccgcgctggagctcagcaatgaactgaccaagttggccaacatcgagaaggagttc
aaggataaaaagagccataaaaaagagaccatgcagcacaattgcttctccctgaatgac
tatcgcaagctgtctatgcagtgtaaggactttgtagtgggagtgcttgacctctgtcgg
gacacggaggaagtggaagccattttgaatggagatgttactgctgagaaggaggcgggg
aagggccttcgctctctcctgagcagggtcaaactggccatcaagtacgaggtgaaaaag
tttgtggcccaccccaactgccagcagcagctgctgacgatctggtatgagaacctgtcg
ggcctgagggagcagaccatcgctgtgaagtgcctggtggtggtggcggtggcttttggt
ctgcccctactggccatgggctactggttcgctccctgcagtcggctgggaaatgtcctg
cgcagccccttcatgaagtttgtggcccatgccgcctccttcatcatcttcctgtgcctg
ctgttgttcaacgcatcagaccgcttccagggcatcagcaccatgccaaacgtgaccgtc
actgaccaccccatgcagatctaccgggtcaagaccaccgaattcagctggaccgagatg
ctcatcatggtctgggtcacagggatgatgtggtcagaatgtaaggagctgtggaccgag
gggcccagggagtacatgcagcagctgtggaacgttctggacttcggcatgctttccatc
ttcattgccgctttcaccgctcggttctttgccttcctccaggccaccagagcccagcag
tacgtcaacgaaaagatccacaccaccgacctttccctagtgaccctacccccggaggtc
aaatactttacctacgcaagggacaagtggctgccgtcggacccccagctgatctcagaa
gggctgtacgccatcgctgtggtgctgagcttcacacgcatcgcttacattctgccggct
aatgagagctttggaccactccagatctccctgggccgcacggtcaaagacatcttcaag
ttcatggtcctattcatcatggtcttcctggcgttcatgatcggcatgttcatcctctat
tcttactacttgggtgccaaggtcaacccggccttcaccacggtggaggagagcttcaag
actctgttctggtctatatttggactgtccgaggtgtcctctgtggtgctcaagtacaac
cacaagttcatcgagaacatcggctatgtgctctatggaatctacaacgtgaccatggtg
gtggtgttgctcaacatgctgatcgccatgatcaacagctcctatcaagaaatcgaggac
gatgcggacgtggagtggaagtttgcacgctccaagctatggctgtcatactttgacaac
ggcaagacactgcctcctcccttcagcatcgttcccactcccaagtccttctaccaccac
atcaggtggatagtcggcatgctgcattgccgacaaaggagtgtgaagaaggatctagag
ctggggttggacagttcaaagtccaggctcaatctcttcacccagtccaacctacgcatt
gcagagtcccacagcattctgaaccaacccacttgctatcagcaaatcatgaagcgactc
atcaaacgctacgttttgaaagcacaagtggacaaagaaaatgacgaggtcaatgaaggt
gaactgaaagaaatcaagcaggacatctccagtttacgttacgaactcctggaagacaag
tctcaggctacagaggagctgtccttgcttatccagaaactgagtgataaactgaaccta
ggccctactacacgcttgccctacaagtga
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