Oncorhynchus masou masou (cherry salmon): 135546570
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Entry
135546570 CDS
T10723
Name
(RefSeq) oxysterols receptor LXR-alpha-like isoform X1
KO
K08536
liver X receptor alpha
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03320
PPAR signaling pathway
omm04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
135546570
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
135546570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omm03000
]
135546570
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
omm03310
]
135546570
Transcription factors [BR:
omm03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
135546570
Nuclear receptors [BR:
omm03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
135546570
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GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
135546570
NCBI-ProteinID:
XP_064831191
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Position
1:56969717..56994341
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AA seq
467 aa
AA seq
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MSTLSATDITDVGHGEVFDGDPELQLDCLCSGDDRSSAEMKHEGNLLPLEPPDHAGFSSS
PQKRPPSLAEDSSPLPMEPSDIKADPAGSMPANTEGQPVKRKKGPAPKMLGNEVCSVCGD
KASGFHYNVLSCEGCKGFFRRSVIKSAQYSCKNNGRCEMDMYMRRKCQQCRLRKCREAGM
LEQCVLSEEQIRVKKMKKNEEETARTSAVVTPTPVPEVVPLAPEQLEMIEKLVAMQKQCN
KRSFIDRPKVTPWPQCQDPQNREVRQQRFAHFTELAIMSVQEIVDFAKQLPGFLELTRED
QIALLKTSTIEIMLLETSRRYNPAIESITFLKDFSYNKEDFAKAGLQLEFINPIFEFSKG
MNDLHLDEAEYALLIAINIFSAGQRSSDRPNVQDHELVERLQQPYVDALRSYIMIKRPND
HLMFPRMLMKLVSLRTLSSVHSEQVFALRLQDKKLPPLLSEIWDVHE
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgtccacactgtctgcgactgatatcacagatgttggtcatggtgaggtgtttgacggg
gacccagagctgcagctggactgcctctgcagtggtgacgaccgcagcagtgcagaaatg
aagcatgagggcaacctcctccccctggaaccacctgaccatgcagggttttccagctcc
ccccagaaaaggcctccctcactagctgaggatagcagcccattgcccatggagcccagt
gacatcaaggccgaccccgccggcagcatgcctgccaacacagagggccagccggtgaag
aggaagaagggtccagcccccaagatgctgggaaacgaggtgtgcagcgtgtgcggggac
aaggcctcaggcttccactacaacgtgctgagctgcgagggctgcaagggcttcttccgg
cgcagcgtcatcaagagtgcccagtattcgtgcaagaacaacggccgctgtgagatggac
atgtacatgcgccgcaagtgccagcaatgccggctgcgcaagtgccgtgaagcgggcatg
ctggagcaatgcgttctctcagaggagcagatccgagtgaaaaagatgaagaagaacgag
gaagagactgcacgcacgtctgccgtggtgacccccaccccggtgccagaggtggtcccg
ctggcgcccgagcagttggagatgatcgagaaactggtggccatgcagaagcagtgcaac
aagcgctcgttcatcgaccggcccaaagtcacgccgtggccccaatgtcaggaccctcag
aacagggaggtgcggcagcagcgctttgcccacttcactgagctggccatcatgtcggtc
caggagatagtggactttgccaagcagttgcctggcttcttagagctcaccagagaggac
cagattgccctgctgaagacctcaaccattgagatcatgctgctggagacatcgcggaga
tacaaccctgccattgagagcatcacgttcctgaaggacttcagttataacaaggaggat
tttgccaaagcagggctgcagttggagtttatcaaccccatttttgagttctccaagggc
atgaacgacctgcacctggacgaggcggagtatgctttgctcatcgccattaacatcttc
tctgcaggtcagaggtcaagtgaccggcccaatgtgcaggaccatgaactggtggagcga
ctgcagcagccgtatgtggacgcacttcgttcttacatcatgataaagagaccaaacgat
cacctgatgtttccacgcatgctcatgaagctggtcagcctccgcaccctcagcagcgtc
cactctgagcaggtcttcgccctgcgcctccaggacaagaagctcccgccgctgctgtct
gaaatctgggacgtccacgagtga
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