Oncorhynchus masou masou (cherry salmon): 135547384
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Entry
135547384 CDS
T10723
Name
(RefSeq) cystathionine beta-synthase-like
KO
K01697
cystathionine beta-synthase [EC:
4.2.1.22
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm00260
Glycine, serine and threonine metabolism
omm00270
Cysteine and methionine metabolism
omm00670
One carbon pool by folate
omm01100
Metabolic pathways
omm01230
Biosynthesis of amino acids
Module
omm_M00035
Methionine degradation
omm_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
135547384
00270 Cysteine and methionine metabolism
135547384
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
135547384
Enzymes [BR:
omm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.22 cystathionine beta-synthase
135547384
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Motif
Pfam:
PALP
CBS
Methyltransf_12
Glyco_tran_WecG
DUF7317
Motif
Other DBs
NCBI-GeneID:
135547384
NCBI-ProteinID:
XP_064832442
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Position
10:complement(24610536..24638582)
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AA seq
625 aa
AA seq
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MSSVFSSTDSVGAEPSVCPNAAKLSNAHANEVAAILKGGSKVNGEAMLNGHKLSMNGLAQ
VNEDSAGHKAQNGSVHVNGHEGENDLEKAAAGVEERQWIRPDLPSKCTWKLGGSSVESPH
CHSELTEAPSILPNILGKIGDTPLVRMNKIPKAFGLKCELLAKCEFFNAGGSVKDRISLR
MVEDAERNGILKPGDTIIEPTSGNTGIGLALASAVKGYRCIIVMPEKMSMEKVDVLRALG
AEIVRTPTAARFDSPESHVGVAWRLKNEIPNSHILDQYRNPSNPLAHYDTTAEEILEQCD
GKVDMLVAGAGTGGTITGIARKLKERCPNIKIVGVDPEGSILAEPEELNKTDKTQYEVEG
IGYDFIPTVLDRSVVDRWYKSNDDESFAMSRMLIREEGLLCGGSSGTAMAAAVRMATELK
EGQRCVVILPDSIRNYMSKFLSDNWMCDKGFLTPEDLMVSKPWWWNLSLQGLNLFSPLTV
LPSVNIKKTIKILKENAFDQAPVVDESGGILGMVTLGNMLSSVLAGKVKASDPVAKVLYK
QFKQVRLTDNLGKLSRILETDHFALVVHEQIQYMEDGSPCLRQMVFGVVTAIDMLNYITT
RERRGSARERTLSECSITSECSLTD
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcggttttctccagcacggactctgtgggcgccgagccctccgtctgccccaat
gcagccaagctcagcaacgcacatgccaacgaagtggctgccattttgaaaggggggtcc
aaggtcaatggagaagccatgttgaacggccacaagctctccatgaatggattggctcaa
gtgaacgaggacagtgctggccataaggcccagaatgggtcggtccatgtgaacgggcac
gagggggagaacgatctagagaaggcagccgcaggcgtggaggagaggcagtggatccgt
cctgacttgcccagcaaatgcacttggaaactgggcgggtcttccgtagagtcccctcac
tgccactctgaactgactgaagctcccagcattctacccaacatcctcgggaagatcgga
gacacacctctggtccgcatgaacaagatccccaaagcctttggccttaagtgtgaactc
ttggccaagtgtgagttctttaacgcagggggcagtgtgaaggaccgtatcagtctaagg
atggtggaggatgcagagagaaatgggatcctcaaaccaggagacaccatcatcgagccc
acctctggcaacacaggtattggtctggccctggcctctgcagttaaaggctatcgctgc
atcatcgtcatgcctgagaagatgagcatggagaaggtggatgtgcttagagccttgggg
gcagagatcgtgcgtaccccaaccgccgcccgctttgattcgccggaatcccacgtgggc
gtggcctggcgtctgaagaatgagattcccaactctcatatcctggaccagtaccgtaac
cctagcaaccccctggcccactacgacaccactgccgaggagatcctggagcagtgtgat
ggtaaggtggacatgttggtggcaggagctggcactggtggcaccatcactggcatcgcc
cgcaagctgaaggagagatgccccaacatcaagatcgtgggtgtggaccctgagggttct
atactggctgagccagaggagctgaacaaaacagataagacccagtacgaggtggagggc
atcggatatgacttcatccctactgtactagacagatctgtagttgacaggtggtataag
tccaatgacgatgagtcttttgccatgtcacgcatgctgatcagggaggaggggcttctc
tgcggaggtagttcaggtacggccatggctgcagcagttagaatggccacagagctgaag
gagggccagcgctgtgtcgtcatcctgcctgactccatccgcaactacatgtctaagttc
ctgagtgataactggatgtgtgataagggcttcctaaccccagaagacctgatggtgtcc
aaaccctggtggtggaacctgagtctgcagggtctgaacctattttcccccctcactgtg
ctgccttcagtcaacatcaagaagaccatcaagatcctcaaggagaacgccttcgaccag
gcacccgtcgttgacgagtccggcgggatcctagggatggttaccctgggcaatatgttg
tcttcagtactggctgggaaggtcaaggcctctgaccctgtcgccaaggtgctttacaaa
caattcaaacaggtgcgactaacagataacctgggtaagctgtcccgtatcctggagaca
gatcactttgccctggtggtgcatgagcagatccaatacatggaggatggctcgccctgt
cttagacagatggtattcggggtggtgaccgccattgacatgcttaattacatcaccacg
cgcgagcggcggggaagcgcacgcgagcgcacgctgtcagagtgctcaataacgtcagag
tgctcgctgaccgactag
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