KEGG   Oncorhynchus masou masou (cherry salmon): 135548347
Entry
135548347         CDS       T10723                                 
Name
(RefSeq) lysine-specific demethylase 2B-like isoform X1
  KO
K10276  F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27]
Organism
omm  Oncorhynchus masou masou (cherry salmon)
Pathway
omm03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:omm00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    135548347
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:omm03000]
    135548347
   04121 Ubiquitin system [BR:omm04121]
    135548347
   03036 Chromosome and associated proteins [BR:omm03036]
    135548347
Enzymes [BR:omm01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.27  [histone H3]-dimethyl-L-lysine36 demethylase
     135548347
Transcription factors [BR:omm03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    135548347
Ubiquitin system [BR:omm04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     135548347
Chromosome and associated proteins [BR:omm03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    135548347
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     135548347
SSDB
Motif
Pfam: PHD_4 zf-CXXC JHD F-box-like F-box JmjC Cupin_8 LRR_4 LRR_At1g61320_AtMIF1 Rubredoxin
Other DBs
NCBI-GeneID: 135548347
NCBI-ProteinID: XP_064833917
LinkDB
Position
11:23109692..23162564
AA seq 1422 aa
MGMGSYFTWTKVSFMRASGWTEWPNVEQCRTLEEATTTTIYTTPKRSICRTMYDENEDFS
DVEEIANVRGFNLEEKLVSNSYNRHFVQLMDGKDFTYEYVQREALQTPLIFKAKDGLGLR
MPDPEFTVSEIKGLVGSRRAVDVMDVSTQKGSEMSMAQFARYYETPEEERDKLFNVISLE
FSHTKLENLVKRPTVVDLVDWVDNMWPLKLKQRQTEATNVISEMKYPKVQKYCLMSVKGC
YTDFHIDFGGTSVWYHVFKGGKVFWLVPPTPHNLTLYEDWVLSGKQSDVFLGDRADGCQR
VELKQGYTFFIPSGWIHAVYTPEDTLVFGGNILHSFNIPMQLSIYEIENRTKVHSKFRYP
FYNEMCWYVLERYVHCLTKRSHLAPEFHRDPLLIDLETKLSTESPSSDSRSQDMDEEDSC
EMQQERDERSDRSAFDDPCSPDNRKGKPSAPQPLKAALDDSCNPTSIQPPEFPKTPSGSP
GSESQSKWTHLTEFELKGLKALVEKLEALPENKKCVPDGMEDPQALLDDMKVVLKEHEDD
DPKMAATGVPVVCWPKKSSKQQRPPNRPKPKMAASSPAPAVKLSASRSTSGARRRRTRCR
KCEACLRTECGECHFCKDMKKFGGPGRMKQSCIMRQCIAPVLPHTAVCLVCGEAGKEDTV
EEEEDKFNLMLMECSICNEIVHPLCLKVKNSGGVVNEELPNCWECPKCNHAGKTGKAVKQ
KRGPGFKYASNLPGSLLKDSRLNRDVKEESELPSVPTSPTAVKRKAERDDTPKRKAEEYP
PLKKRSPMLSLGGLPHPRPRPEDNPLRKKRKLFDIKDEDEPPVVKKKKKPPKPDDTFTSK
LLRPIKQEKVDEDEDHEDDRYTGDRVAAKGKREEDEDKEDDEEEEEEKDGVEDSKDGKVK
TVLSPLLRTSAARESDQSCSSSPRAGPSSEGGDAPDKTLGQLKAHQRRRLPNKELSKELS
KELNLEIQKTEDCLANQSRRPLKGENSPTNNNRRPLKTEDSSINQNRRPLKTEDSPTNHN
RRPIKTEDGLSNHNRRPLKTEDCLANQNHRPMKTEPESDGEEPKPKRPLDNGSSDLGDWL
HPRGREVNGTPRQLSPLGWNRSPPITPICPRPPPCHSPPKCVQMERHVIRPPPISPPPDR
LPLDDGQAHVMRREVWMVVFSHLAHRDLCVCMRVCKTWNRWCCDKRLWTQIDLNRCKSIT
PLMLSGIIRRQPVALDLSWTNISKKQLSWLINRLPGLRMLLLSGCSWVAVSALCTASCPL
LRTLDVQWVEGLKDAQMRDLLSPPTDNRPGQLDNRSKLRNVVDLRLAGLDITDTSLRLLI
RYMPQLTRLDLSYCNHVTDQSVNILTAAGTTTRDSLTDINLSVCNRVTDQSLTYFKRCGS
ICHIDLRYCKQVSKEGCEQFIAEMSVSVQFELVEEKLLLKLS
NT seq 4269 nt   +upstreamnt  +downstreamnt
atgggcatggggagttattttacctggacaaaggtcagctttatgagggcttctgggtgg
accgagtggccaaatgtggaacagtgtcggactttggaagaggcaacaacaaccacaata
tacacaactcctaagcgctccatctgccggacaatgtacgacgaaaacgaggacttctct
gacgttgaagaaattgcaaatgtcaggggttttaatctggaggagaaacttgttagcaat
tcgtacaacagacatttcgttcagttgatggacggcaaagatttcacttatgagtatgtt
caaagagaagcactccagacccctcttattttcaaagccaaagatggactggggctcaga
atgccagacccggagttcaccgtcagtgagattaagggtttggttggtagccgtcgtgcc
gttgatgtgatggacgtgagcactcagaaaggctctgagatgagcatggcccagtttgcc
cgctactatgagactcctgaggaggagcgggacaaactctttaatgttatcagcctggag
ttcagccacaccaaactggagaatctcgtcaagaggcccactgtagtggatctagtggac
tgggtggacaacatgtggccccttaaactgaaacaaagacaaactgaagccactaatgtc
atctcagagatgaagtaccccaaagtacagaagtactgtttgatgagcgtgaagggctgc
tatactgacttccacattgatttcgggggcacgtctgtgtggtatcacgtgttcaaggga
ggaaaggtgttctggctggtgcctccgacacctcataaccttaccctgtatgaggactgg
gttctgtcaggcaagcagagtgacgtcttcctgggagatcgtgcagatggctgccagaga
gttgagctaaaacagggctacaccttcttcatcccctccggctggattcatgcagtctac
acccccgaggacacactggtgttcggaggcaacattctgcacagctttaacattcccatg
caactctcaatctatgagatagagaacaggactaaggttcattccaagttccgctacccg
ttctacaatgagatgtgctggtatgtcctggagaggtacgtgcactgcctgaccaagcgc
tcccatctcgctccggagtttcacagagatcctctgctaatcgatttggaaacgaagctg
agcactgagagcccctcctctgactcgcggagtcaggacatggacgaggaggactcctgc
gagatgcaacaggaacgagatgaacggagtgacaggtcagcatttgatgacccctgctct
cctgataacaggaagggtaaacccagcgcccctcagcctcttaaagctgccttggatgat
agctgcaaccccacctccatccagcctccagagttccccaaaaccccctctggttcgcca
ggctcagagtctcagagtaaatggactcatttgactgagtttgaactgaagggccttaag
gccctggtggagaagctggaagcactccccgaaaataagaaatgtgtcccagatggcatg
gaggacccccaggccctgctggatgacatgaaggttgtcttgaaggaacatgaagacgat
gatcccaaaatggctgccactggtgtacctgtggtgtgctggcccaagaagtcttccaag
cagcagagacctcccaacaggcccaaacccaaaatggcggcctcgtctccagcgcctgcg
gtcaagctatcggccagccggagcacatctggggcccggagaaggaggacacgatgtcgg
aagtgtgaggcgtgcctgaggacagagtgtggagaatgccacttctgtaaagacatgaag
aagtttggagggccgggtcgcatgaaacagtcctgcatcatgaggcagtgtatcgcgcct
gtcctgccccacactgcggtgtgtctggtgtgtggggaggcagggaaggaggacacggtg
gaggaagaggaggacaaatttaacctcatgctcatggagtgctccatctgcaatgagata
gtccatcccctctgcctaaaggtgaagaattctggtggagttgtaaatgaagagttgcca
aactgctgggagtgtccgaaatgcaaccatgcagggaagaccgggaaagctgtcaagcaa
aaaagaggaccaggattcaagtacgcgtccaaccttcccgggtcactgctgaaggactcg
cgattgaaccgtgacgttaaggaagagtccgaactgcccagtgtgccaacatcacccact
gcagtgaagaggaaggcagagcgtgatgacacccccaagaggaaagcagaggaatatcct
cctctgaagaaacgttctcccatgttgtctctgggcgggctacctcatccccgacccagg
cctgaggacaaccctctgaggaagaagaggaagctgttcgacatcaaagatgaggacgag
cctcctgttgtcaagaaaaagaagaagcccccaaaacctgatgacaccttcacctccaag
ctgttacggcccatcaagcaagagaaagttgatgaggacgaagaccatgaagatgacaga
tacacaggggacagggttgcagctaaagggaaaagagaagaggatgaagataaggaggat
gatgaggaagaagaagaggagaaagatggtgtagaggacagtaaagacggtaaagtaaag
actgtgctgagtccactgctacggacgtctgcagccagagagagtgaccagtcctgctcc
agctctccccgggcagggcccagcagtgaggggggcgatgccccagacaagacacttggc
cagctgaaggcacaccagcgacgccgtctacccaacaaagagctgagcaaggagctgagc
aaagagctcaacctggagatccagaagaccgaggactgcttggccaatcagagccgcaga
ccactgaagggggagaacagcccaaccaataacaaccgtcgaccactgaagactgaggac
tcctctatcaatcagaaccgcagaccactaaaaacagaggactcccccaccaatcataac
cgcaggccaattaagacagaggatggcctatccaatcacaaccgtcgaccattgaagaca
gaggactgcttggccaatcagaaccacaggccaatgaagacagagcctgagagtgacggg
gaggagcctaagcccaaacggccactcgacaacggcagcagtgacctcggagactggctc
caccccagggggcgggaggtgaatgggacgccccgccagctctcgcccctggggtggaac
cgcagccctccgatcacacctatttgcccacgcccccctccctgccactcaccacccaag
tgtgtacagatggagcgtcacgtgatccggccgcctcccatcagccccccaccagacaga
cttcccctggatgacggacaggcccacgtgatgcgcagggaggtgtggatggtcgtgttc
agccacctcgcacacagagacctgtgtgtctgcatgcgtgtctgcaagacctggaacaga
tggtgctgtgataagaggctgtggacgcagatcgatctgaaccgctgtaagtcaatcact
cccctcatgctgagtggcatcatccgcagacagcctgtggctctggacctcagctggacc
aacatctccaagaagcagctcagctggctcatcaacagactgccaggtctgcggatgctg
ctgctctcaggctgctcctgggtggctgtgtctgccctctgcaccgccagctgtccgctg
ctgcggaccctggacgtccagtgggtagagggtctcaaagacgcccagatgagggatctg
ctctcaccccccacagacaacagaccaggtcagctggacaacaggagtaagctgcgaaat
gtggtggacctgcgtctggccgggctggacatcacggacacctctctgcgcctcctcatc
cgctacatgccccagcttaccagactggacctgagctactgcaaccacgtcactgaccag
tcagtcaacatcctgaccgctgcagggaccaccaccagagactcgctcactgacatcaac
ctctccgtgtgcaacagagtcacggaccagtccctgacttacttcaagcgctgtggaagc
atctgtcatattgacttgcgatactgcaagcaggtgagcaaagagggctgcgagcaattc
attgctgagatgtcagtgagtgtacagtttgaactagtagaggagaaactactgctgaaa
ctcagctag

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