Oncorhynchus masou masou (cherry salmon): 135550247
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Entry
135550247 CDS
T10723
Name
(RefSeq) platelet-derived growth factor receptor beta-like isoform X1
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04010
MAPK signaling pathway
omm04020
Calcium signaling pathway
omm04510
Focal adhesion
omm04540
Gap junction
omm04810
Regulation of actin cytoskeleton
Brite
Enzymes [BR:
omm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
135550247
Protein kinases [BR:
omm01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
135550247
CD molecules [BR:
omm04090
]
Proteins
135550247
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
135550247
NCBI-ProteinID:
XP_064836940
LinkDB
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Position
12:complement(48823114..48847110)
Genome browser
AA seq
1104 aa
AA seq
DB search
MWRGTLPRVLSIHTGTMELGLAKSLPLVAIFTVLLQFCPEGFSLELSPSEKEVILSTNSS
FTVVCSGWSKVTWKSPHDPSLEGVAVEDRGTTSVLVLHNVTWRHSGNYICEEPSTEEAKD
ISVFVPDPEEWFLPLQQAVVMKEGEEGTIPCVVTDPGINVTLYERASKARVEGTYHPSKG
FTAILKDSSYICRGAMNGEEKASQVYYVYSIVVPKSMNAFMTLSKTVLKQGEALMVNCTV
EEAEMVYFEWDFPRKETIEPLTDFLSEIRIRSFLNISSVTLKDSGQYICRVQDPFSGKSA
VDNLTVTVLERGFVDLEPSINTNVSALQYQSVALTVQIEAFPKPQVLWTRDNTTLTGETV
SIDTREVHETSYLSTLTLVRVRMEQRGPYTVHVANEDDVKEITFDLQVKSSPKIIDLSDQ
HIDQGHGVLCVTEGVPTPTVHWYSCESIGKCSNKTTAWKSLSADQENVSIQMNVSYIEAS
GVNQVRSLLTFQTMGGITSVRCEARSERGRRAWDIKLVSNSLFSQVAVLAAVLALVVIAV
IFLIILIALWRKKPRYEIRWKVIESVSSDGHKYTYMDPMHLPYDCVWEVPRDSLVLGHTL
GSGAFGRVVEATAYGLGHSQSTTKVAVKMLKSTARTSETQALISELKIMSHLGPHLNIVN
LLGACTKRGPIYLITEYCCYGDLVDYLHRNKHTFLQYYADKNRRDADMCRNSTESTVQIQ
GKSECDGGYMDMTKEDSLNYVPMQELSDNIKYADIEPSVNETPYHQDNNYQGQGQERADV
ALSISDSPILSYTDLVGFSYQVAKGMDFLASKNCVHRDLAARNVLICEGKLVKICDFGLA
RDVMNDSNYIAKGKTFLPLKWMAPESIFQNLYTTLSDVWSFGILLSEIFTLGGTPYPDIP
MNEQFYTALKRGYRMPKPAHATDEIYDIMCKCWDEKFKKRPLFSSLVNLTGNLLTDAYKK
KYTQVNESFLKSDHHAAIRSKPTPAGNPAVSSDDHSSGDRTGQETGEIEETGKEAGPSQT
DYIIAIPDIHVVEEAEAGGEVLDTATQSTSSPPSTTDQADTASLDGPETPLEEPVPTEEA
VLAPTQEDKLPQSPCTPEVEESFL
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atgtggagaggaactctcccaagagtgttatcaattcacactggcactatggagttgggc
ttggcaaagtctctgcctttggtggccatctttacagtgctgctgcagttttgtccagag
ggcttcagtctggagctcagccccagtgagaaggaggtcatactgagcaccaactcctcc
ttcacggtggtctgttctggttggagcaaggtgacctggaagtctccgcacgaccccagc
ctggagggagtggctgtggaggacaggggaaccaccagtgtgctggtcctccacaacgtc
acctggaggcactctgggaactatatctgtgaagagccctctacagaggaggccaaggac
atatcggtgtttgtaccagaccctgaggaatggtttcttcccctgcagcaagcagtggtg
atgaaggagggagaggaaggtaccattccctgcgtggtgactgaccctggcattaacgtg
accctgtacgagagggccagcaaggcccgtgtggagggaacataccaccccagtaaaggg
ttcaccgccattctgaaagacagctcctacatctgccgaggtgccatgaacggagaggag
aaggcgtcccaggtgtattatgtctacagtattgtggtccccaaatccatgaatgccttc
atgacactctcaaagacggtgctgaaacaaggcgaggccttaatggttaattgtactgta
gaagaagcagagatggtttacttcgaatgggattttcctcgtaaagagacaattgagcca
ctgacagactttctatcggagattagaatccgctccttcttgaacatctccagtgttact
ctgaaggactctggccagtacatctgccgagtgcaggaccctttttccggaaagtcagcc
gtggataatctcactgtcactgttctggaacggggctttgtggatttggaaccctccatc
aacaccaatgtttcagcgctgcagtatcagagcgttgcactcacagtgcagatcgaagcg
tttcccaaacctcaggtgctctggaccagagacaacaccacccttactggggaaactgta
tccattgacaccagagaggtgcatgagaccagttacctcagtactctgaccttggtaagg
gtccggatggaacagagggggccctacactgtccatgtggccaatgaagacgacgtcaag
gagataacctttgatcttcaagtcaagtcttccccgaagataatagatttgtctgaccag
cacatagaccagggccacggagtgctctgtgtcacagagggggtccccacacccaccgtc
cactggtacagctgtgaaagcattggaaaatgcagtaataagaccacagcatggaagtct
ctgtcggctgaccaagagaacgtcagcatccagatgaacgtcagctacatcgaggcctca
ggggtcaaccaagtccgcagccttttgaccttccagaccatggggggtattacatcagta
cgctgtgaagcccgcagcgagagagggcgcagggcctgggacatcaaactggtctcgaac
tctctgttctcccaggtggctgtcttggctgcagtgttagccctggtggtcattgccgtc
atcttcctcatcatcctcatcgccctttggagaaagaagccccggtatgagatccgttgg
aaggtgatcgagtcagtgagctcagatggccataagtacacctacatggaccccatgcac
ctgccatatgactgtgtatgggaggttccccgggatagcctggtcctgggtcacactctg
ggttctggagcatttgggagggtcgtggaggctacagcctatggccttggtcactctcag
tccaccaccaaagtggctgtgaagatgctcaagtccacagcaaggacaagtgagactcag
gctctgatatctgagctgaagataatgagtcaccttgggccccatctaaacattgtcaac
ctactgggggcttgtacgaaacgaggtcccatttacctcataactgagtactgttgctat
ggtgacctggttgactaccttcaccgcaacaagcataccttcctacagtactacgcagac
aaaaaccgcagggatgctgatatgtgcaggaacagcacagagagtacagtccaaatccaa
ggaaaaagtgagtgcgatgggggttacatggacatgaccaaggaagattctttaaattat
gtcccaatgcaagagctcagtgacaacatcaagtatgcagacatcgagccttcagtcaat
gagacaccctaccatcaggacaacaactaccaaggacaaggccaagagagagcagacgtc
gcgttgtctatcagtgactccccaattctgagctacacagatctggtgggctttagctac
caagtggctaagggcatggacttcctggcatccaagaattgtgttcatcgtgacctggct
gccagaaatgttctcatctgcgagggaaagctggtgaagatctgtgattttggcctggcc
cgtgatgtcatgaacgactccaactacatagccaaaggcaaaacattcctgccactgaag
tggatggctccagagagtatcttccagaacctctacacaaccttgagcgatgtttggtct
tttggcattctgctttcagagatctttactctaggaggaacgccctatcctgacattccc
atgaatgaacagttctacactgccttgaagagaggctacaggatgcctaaacctgctcat
gctacagacgagatctatgatatcatgtgcaagtgttgggatgagaaattcaagaagagg
ccactcttctcctctctggttaatttgacgggaaacctgctgactgatgcttacaaaaag
aaatacacccaggtgaatgagagctttctgaagagcgaccaccatgctgcaatcaggtcc
aaacctacaccagcagggaacccggctgtgtcttcagatgaccactcctcaggggatcga
acgggtcaggagacaggggagatagaggagactgggaaggaggctggcccctcccagact
gactacataatcgccatcccagatatccatgtagtcgaagaggcagaagcaggtggtgag
gtgctggacaccgccacacagagtacatcaagtcctccaagcacaaccgaccaggctgat
acagcctccctggatggaccagaaacacccctagaagaaccagtacccacagaggaagcg
gtgcttgctcccacgcaagaagacaagctcccccagtctccatgtacccctgaagtggag
gagagtttcctgtag
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