Oncorhynchus masou masou (cherry salmon): 135550247
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Entry
135550247 CDS
T10723
Name
(RefSeq) platelet-derived growth factor receptor beta-like isoform X1
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04010
MAPK signaling pathway
omm04020
Calcium signaling pathway
omm04510
Focal adhesion
omm04540
Gap junction
omm04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
135550247
04020 Calcium signaling pathway
135550247
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
135550247
04540 Gap junction
135550247
09142 Cell motility
04810 Regulation of actin cytoskeleton
135550247
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
omm01001
]
135550247
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
omm04090
]
135550247
Enzymes [BR:
omm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
135550247
Protein kinases [BR:
omm01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
135550247
CD molecules [BR:
omm04090
]
Proteins
135550247
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
ig
Ig_2
V-set
VEGFR-1-like_Ig-like
C2-set_2
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
135550247
NCBI-ProteinID:
XP_064836940
LinkDB
All DBs
Position
12:complement(48823114..48847110)
Genome browser
AA seq
1104 aa
AA seq
DB search
MWRGTLPRVLSIHTGTMELGLAKSLPLVAIFTVLLQFCPEGFSLELSPSEKEVILSTNSS
FTVVCSGWSKVTWKSPHDPSLEGVAVEDRGTTSVLVLHNVTWRHSGNYICEEPSTEEAKD
ISVFVPDPEEWFLPLQQAVVMKEGEEGTIPCVVTDPGINVTLYERASKARVEGTYHPSKG
FTAILKDSSYICRGAMNGEEKASQVYYVYSIVVPKSMNAFMTLSKTVLKQGEALMVNCTV
EEAEMVYFEWDFPRKETIEPLTDFLSEIRIRSFLNISSVTLKDSGQYICRVQDPFSGKSA
VDNLTVTVLERGFVDLEPSINTNVSALQYQSVALTVQIEAFPKPQVLWTRDNTTLTGETV
SIDTREVHETSYLSTLTLVRVRMEQRGPYTVHVANEDDVKEITFDLQVKSSPKIIDLSDQ
HIDQGHGVLCVTEGVPTPTVHWYSCESIGKCSNKTTAWKSLSADQENVSIQMNVSYIEAS
GVNQVRSLLTFQTMGGITSVRCEARSERGRRAWDIKLVSNSLFSQVAVLAAVLALVVIAV
IFLIILIALWRKKPRYEIRWKVIESVSSDGHKYTYMDPMHLPYDCVWEVPRDSLVLGHTL
GSGAFGRVVEATAYGLGHSQSTTKVAVKMLKSTARTSETQALISELKIMSHLGPHLNIVN
LLGACTKRGPIYLITEYCCYGDLVDYLHRNKHTFLQYYADKNRRDADMCRNSTESTVQIQ
GKSECDGGYMDMTKEDSLNYVPMQELSDNIKYADIEPSVNETPYHQDNNYQGQGQERADV
ALSISDSPILSYTDLVGFSYQVAKGMDFLASKNCVHRDLAARNVLICEGKLVKICDFGLA
RDVMNDSNYIAKGKTFLPLKWMAPESIFQNLYTTLSDVWSFGILLSEIFTLGGTPYPDIP
MNEQFYTALKRGYRMPKPAHATDEIYDIMCKCWDEKFKKRPLFSSLVNLTGNLLTDAYKK
KYTQVNESFLKSDHHAAIRSKPTPAGNPAVSSDDHSSGDRTGQETGEIEETGKEAGPSQT
DYIIAIPDIHVVEEAEAGGEVLDTATQSTSSPPSTTDQADTASLDGPETPLEEPVPTEEA
VLAPTQEDKLPQSPCTPEVEESFL
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atgtggagaggaactctcccaagagtgttatcaattcacactggcactatggagttgggc
ttggcaaagtctctgcctttggtggccatctttacagtgctgctgcagttttgtccagag
ggcttcagtctggagctcagccccagtgagaaggaggtcatactgagcaccaactcctcc
ttcacggtggtctgttctggttggagcaaggtgacctggaagtctccgcacgaccccagc
ctggagggagtggctgtggaggacaggggaaccaccagtgtgctggtcctccacaacgtc
acctggaggcactctgggaactatatctgtgaagagccctctacagaggaggccaaggac
atatcggtgtttgtaccagaccctgaggaatggtttcttcccctgcagcaagcagtggtg
atgaaggagggagaggaaggtaccattccctgcgtggtgactgaccctggcattaacgtg
accctgtacgagagggccagcaaggcccgtgtggagggaacataccaccccagtaaaggg
ttcaccgccattctgaaagacagctcctacatctgccgaggtgccatgaacggagaggag
aaggcgtcccaggtgtattatgtctacagtattgtggtccccaaatccatgaatgccttc
atgacactctcaaagacggtgctgaaacaaggcgaggccttaatggttaattgtactgta
gaagaagcagagatggtttacttcgaatgggattttcctcgtaaagagacaattgagcca
ctgacagactttctatcggagattagaatccgctccttcttgaacatctccagtgttact
ctgaaggactctggccagtacatctgccgagtgcaggaccctttttccggaaagtcagcc
gtggataatctcactgtcactgttctggaacggggctttgtggatttggaaccctccatc
aacaccaatgtttcagcgctgcagtatcagagcgttgcactcacagtgcagatcgaagcg
tttcccaaacctcaggtgctctggaccagagacaacaccacccttactggggaaactgta
tccattgacaccagagaggtgcatgagaccagttacctcagtactctgaccttggtaagg
gtccggatggaacagagggggccctacactgtccatgtggccaatgaagacgacgtcaag
gagataacctttgatcttcaagtcaagtcttccccgaagataatagatttgtctgaccag
cacatagaccagggccacggagtgctctgtgtcacagagggggtccccacacccaccgtc
cactggtacagctgtgaaagcattggaaaatgcagtaataagaccacagcatggaagtct
ctgtcggctgaccaagagaacgtcagcatccagatgaacgtcagctacatcgaggcctca
ggggtcaaccaagtccgcagccttttgaccttccagaccatggggggtattacatcagta
cgctgtgaagcccgcagcgagagagggcgcagggcctgggacatcaaactggtctcgaac
tctctgttctcccaggtggctgtcttggctgcagtgttagccctggtggtcattgccgtc
atcttcctcatcatcctcatcgccctttggagaaagaagccccggtatgagatccgttgg
aaggtgatcgagtcagtgagctcagatggccataagtacacctacatggaccccatgcac
ctgccatatgactgtgtatgggaggttccccgggatagcctggtcctgggtcacactctg
ggttctggagcatttgggagggtcgtggaggctacagcctatggccttggtcactctcag
tccaccaccaaagtggctgtgaagatgctcaagtccacagcaaggacaagtgagactcag
gctctgatatctgagctgaagataatgagtcaccttgggccccatctaaacattgtcaac
ctactgggggcttgtacgaaacgaggtcccatttacctcataactgagtactgttgctat
ggtgacctggttgactaccttcaccgcaacaagcataccttcctacagtactacgcagac
aaaaaccgcagggatgctgatatgtgcaggaacagcacagagagtacagtccaaatccaa
ggaaaaagtgagtgcgatgggggttacatggacatgaccaaggaagattctttaaattat
gtcccaatgcaagagctcagtgacaacatcaagtatgcagacatcgagccttcagtcaat
gagacaccctaccatcaggacaacaactaccaaggacaaggccaagagagagcagacgtc
gcgttgtctatcagtgactccccaattctgagctacacagatctggtgggctttagctac
caagtggctaagggcatggacttcctggcatccaagaattgtgttcatcgtgacctggct
gccagaaatgttctcatctgcgagggaaagctggtgaagatctgtgattttggcctggcc
cgtgatgtcatgaacgactccaactacatagccaaaggcaaaacattcctgccactgaag
tggatggctccagagagtatcttccagaacctctacacaaccttgagcgatgtttggtct
tttggcattctgctttcagagatctttactctaggaggaacgccctatcctgacattccc
atgaatgaacagttctacactgccttgaagagaggctacaggatgcctaaacctgctcat
gctacagacgagatctatgatatcatgtgcaagtgttgggatgagaaattcaagaagagg
ccactcttctcctctctggttaatttgacgggaaacctgctgactgatgcttacaaaaag
aaatacacccaggtgaatgagagctttctgaagagcgaccaccatgctgcaatcaggtcc
aaacctacaccagcagggaacccggctgtgtcttcagatgaccactcctcaggggatcga
acgggtcaggagacaggggagatagaggagactgggaaggaggctggcccctcccagact
gactacataatcgccatcccagatatccatgtagtcgaagaggcagaagcaggtggtgag
gtgctggacaccgccacacagagtacatcaagtcctccaagcacaaccgaccaggctgat
acagcctccctggatggaccagaaacacccctagaagaaccagtacccacagaggaagcg
gtgcttgctcccacgcaagaagacaagctcccccagtctccatgtacccctgaagtggag
gagagtttcctgtag
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