Oncorhynchus masou masou (cherry salmon): 135551009
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Entry
135551009 CDS
T10723
Symbol
nod2
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 2 isoform X1
KO
K10165
nucleotide-binding oligomerization domain-containing protein 2
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
135551009 (nod2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
omm04054
]
135551009 (nod2)
Pattern recognition receptors [BR:
omm04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
135551009 (nod2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
CARD
NLRC4_HD2
LRR_6
NOD2_WH
AAA_16
AAA_29
AAA_22
AAA_30
T2SSE
Sigma54_activat
Viral_helicase1
nSTAND3
AAA_25
Motif
Other DBs
NCBI-GeneID:
135551009
NCBI-ProteinID:
XP_064838436
LinkDB
All DBs
Position
1:76866886..76877311
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AA seq
1030 aa
AA seq
DB search
MSINYNPHNNSHFLLRQDYFPAVANWLKLRSYICMSARQLVLRQRAELLRALCCGGSSEG
LESVLDLLLSWGMLFWEDYQNVLVPCRGLCANTRVLLDLVYTKGDETCRLLLAAFKQVIP
EAQRAGLSFGNCRTANLENTRDDTKELHGTAIQTLQTDRPDLVRRLKDHIEGALEVLLHT
GSFTPSDCDEVQLPVFTPSQQARRLLDQVKSKGEPAAKVLLQYFQQTEDHPPPSNQEAPP
KECLSYQKKLRSTVSAQSHFLRTYGGTSSLSLEDIYTEGQLELAQGGSEAQPQTGALGLE
DVVGLVGTLNQEADTVLVSGEAGSGKSTLLQRLHLLWARGEALHDFFLLFSFSCRRLSSV
QRELSLRELLFLHCCWPDGDQDRIFQFILDHPHLILFTFDGLDELMQSFSDSEQRHCCPT
QCAPVPTLLFNLLQGSLMKGVRKVVTSRPEAVGPTLKRYLRKEVLLKGFSPGGIDCFVRK
YHRDPTVATRVLECLRSNTALLGLCHIPVFCWIVSKCYKELLGCGEGEGSPQTITDVYLM
ILLHFFQRRASQRNTMGIGWVQEHQDTALHLGQLAMEGLGASCYIFTGTELQKCGVTEED
ICMGFLIRSKDLSSSTNCKHYEFLHITMQCFFAALYIVLNNNSDRSTIPKLFQLQDRQQQ
PGFHRACLGHCLTQQEGALKEANKAAETPNLQITATFVSGLLAQRQRSLLLLSCPGPTLD
RKSKQVVKCLSKGMQKHFKSIPRPVEGEKKSMHAMPGFVWLIKCIHEMQDSRIARDTMAK
LEVEHLKLTYCNIGPGECTALAYVLQHLRNPVGLQLDYNYVGDVGVEQLLPCLHVCHSVY
LRHNNISDEGIRKLIEKGIQCERFQKIALFNNKLTDACTECFAHLLKMKQNFLSLRLGNN
NITAAGAGQLAEGLRFNRSLQFLGLWGNKIGDKGVEAIANALKDSQTLVWLSLVDNGVGN
AGACALAPLIKNSTLEELWLTKNCITRTGVECLILALESNTSVKAVWLRGNELSPEEVEE
MTQREPRLTF
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgtccattaattataatccacataataattcacatttcctgttgcggcaagattatttt
cctgctgtagcaaactggctcaaattaagatcctacatctgtatgagtgcccggcagctg
gtcctgaggcagagagcagagctgctgcgtgccctgtgctgtggtggctcttctgagggt
ctggagagtgtattggacctacttctgtcttggggcatgctgttctgggaggactaccag
aatgtactggtaccatgccgtggtctgtgtgccaacacaagggtgctactagatctggtg
tacaccaagggagatgagacctgtcgtctgcttctggctgctttcaaacaggtcatccct
gaggcccaaagagctggcctctcttttggaaactgtcgtactgccaatctagaaaataca
agagatgatacaaaagaactacatggtacagctatccagaccctccagacagacaggcct
gatctggtgaggaggctaaaggaccatattgaaggagctctggaggtcctgctgcatacg
ggcagctttacaccatctgattgcgatgaagtgcagctacctgtgtttaccccctcacaa
caggcaaggcgtctactggaccaagtcaaatcaaagggggagcctgcagcaaaggtccta
ctgcaatactttcagcaaacagaggaccatcccccaccatctaaccaagaggctcctccc
aaagagtgcttgtcctatcagaagaagctgcgcagcactgtgtcggcccagtcacatttc
ctcagaacgtatggaggaaccagcagtctgtctctagaagacatctacacagagggtcag
ctggagcttgcccagggtggcagtgaggcccagccccagactggtgctctggggctggag
gacgtggtgggcctggtgggcaccctgaaccaggaggctgacactgtgctagtctctggg
gaggcaggcagtgggaaaagcacccttctccagaggctgcacctcctttgggctaggggg
gaggctctacatgatttcttcctcctcttttccttcagctgccgcaggctgagctcggta
cagagggagctgtctctcagagagctgctgttcctgcactgctgctggccggacggggac
caggaccgaatctttcagttcatcctggaccatccgcacctcattcttttcaccttcgac
ggcctggacgagctcatgcagagcttctcggactcagagcagaggcactgctgccccacc
cagtgtgcccccgtccccaccctgctcttcaacttgctgcagggatccctcatgaagggg
gtgaggaaggtggtgactagccggccagaggcagtgggtcccaccctgaagcggtacctt
cgcaaggaagtcctcttgaaaggcttctcgcctggtgggatcgactgcttcgtgaggaag
tatcatcgcgacccgacggtggccaccagggtcctggagtgtctacgaagcaacacagct
ctactgggcctgtgtcacatcccggttttctgctggattgtgtccaagtgttataaggag
ctgctgggctgtggagagggagagggcagtccccagaccatcacagatgtttacctcatg
atcctgctgcacttcttccagcgccgggcctctcagaggaacacgatggggataggatgg
gtgcaggagcaccaggatactgccctgcatctggggcagctagccatggagggcctgggg
gcctcttgttacatcttcacaggcacagagctacagaagtgtggggtgaccgaggaagat
atctgcatggggttcctcatccgtagtaaagacctctcctcctccactaactgcaaacac
tacgagttcctgcacattaccatgcagtgcttctttgctgctctctacattgtcctgaac
aataactcggaccgctccaccatccctaagctctttcagctgcaggacaggcagcaacag
cctggctttcacagggcatgtctggggcactgcttgacccaacaagaaggggccttgaag
gaggccaataaggcagcagagacccccaacctccagataacagccacttttgtgtctggg
ctcttggctcagcgccaacgtagcctgctgctcctctcctgccctgggcccactctggac
aggaagtccaagcaggtggtgaagtgcctgtccaaaggcatgcagaagcactttaaatcc
atccctcggcccgtggagggggagaagaagagcatgcacgccatgccgggcttcgtgtgg
ctcatcaagtgcatccatgagatgcaggacagcaggatcgccagagacactatggctaag
ctagaggtggaacacctgaagctgacctattgtaacataggccctggggagtgtactgca
ctggcctacgtgctccagcaccttaggaaccctgtggggcttcagctagactacaactat
gtcggagacgttggcgtggagcagctgctgccttgcctgcatgtctgccactctgtatac
ctgagacacaataacatatcagatgagggaattcgtaaattgattgaaaaaggcatccag
tgtgagcgctttcagaagattgcgctcttcaacaacaagctaactgatgcctgcacagag
tgcttcgctcacctcctgaagatgaaacagaattttctctctctaaggctgggaaacaat
aacatcacagcagcaggggcagggcaactggcggagggactgaggttcaatcggtcacta
cagttcttggggctttggggaaataaaataggtgataaaggtgtagaggccattgccaat
gctctcaaagacagccaaaccttggtgtggctcagcctggtagacaatggtgttggcaat
gcaggagcatgtgctcttgccccactcatcaagaacagtacgctagaggagctgtggtta
accaaaaactgcatcacaagaacaggtgtggagtgtctaatactggctcttgaaagcaac
actagtgtgaaggcagtgtggttgagaggtaatgagctcagcccagaagaggtggaggag
atgacacagcgggaacccaggcttacattttga
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integrated database retrieval system
