Oncorhynchus masou masou (cherry salmon): 135551217
Help
Entry
135551217 CDS
T10723
Name
(RefSeq) 72 kDa type IV collagenase-like
KO
K01398
matrix metalloproteinase-2 (gelatinase A) [EC:
3.4.24.24
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04912
GnRH signaling pathway
Brite
Enzymes [BR:
omm01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.24 gelatinase A
135551217
Peptidases and inhibitors [BR:
omm01002
]
Metallo peptidases
Family M10
135551217
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
135551217
NCBI-ProteinID:
XP_064838615
LinkDB
All DBs
Position
1:79147213..79187711
Genome browser
AA seq
659 aa
AA seq
DB search
MGCQTAFSPRHLVLKVFLVQLIAFLQKTSAAPSPIIKFPGDDSPKTDKEVALHYLNKFYG
CPQDRCNLMVLKDTLKKMQKFFSLQETGEIDPKTVEVMKKPRCGVPDVAQYNFFHRKPKW
QQNAITYRILGHSPDLDEETIDDAFLRAFKVWSDVTPLKFTRLMDGEADIMINFGRNEHG
DGYPFDGKDGLLAHAFAPGPGTGGDSHFDDDEQWTLGEGQVVKVKFGNAEGEFCKFPFMF
MGKEYNSCTNQGRDDGFLWCSTTYNFDDDGKYGFCPHELLFTLGGNADGAPCKFPFTFQG
ENYDGCTTQGRDDGYRWCATTENYDNDKSYGFCPETAMSTVGGNSEGSPCVFPFTFLGDT
YDSCTASGRSDGKMWCASTKSYDDDRKWGFCPDQGYSLFLVAAHEFGHALGLEHSQDPGA
LMAPMYTFTKNFRLSNDDIKGIQELYGTGTDKPVPPTQGPVTPMDICNEPVVFDAVAQIR
GETFFFKDRFIFRSTNFRGKPSGPMLVATYWPELPVTIDAAYENPLEEKTVFFAGNEMWI
FNADQIEKGYPKRISSIGLPTDLKGIDAAFSFGKSQKTYLFAGDQFWRYNEAKKKMDPGF
PKLIADSWNGIPDGIDSAFSLNGIDYTYFFKGAHYFKMDDSSLKIVKLGEITKDWLGCH
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atggggtgccagacggcatttagcccccgacaccttgtcctcaaagtgtttttggtacag
ttaatcgcctttctccagaaaacctctgcagccccctcgcccattatcaagttcccagga
gacgatagtccaaaaacagacaaagaagtggctctgcactatctgaacaagttctatggc
tgcccacaagacagatgtaatctcatggtgctgaaagacaccctgaagaagatgcagaag
ttcttctctctgcaagagacgggcgagatcgaccccaagacagtggaggtcatgaagaag
ccccgctgtggagttcctgatgttgcccaatacaacttcttccacaggaaacccaagtgg
cagcaaaacgccatcacctacaggattctaggccactctcctgacctggacgaggaaact
attgatgacgccttcttaagggccttcaaagtctggagtgacgtcaccccactcaagttc
acccgcctcatggatggagaggctgacatcatgattaactttggccgcaacgagcatggt
gatggctaccccttcgatggtaaagatggtctgctggctcatgccttcgctcctggacca
ggcaccggaggagactcccactttgatgacgacgagcagtggaccctgggagaaggacaa
gttgtgaaggtgaagtttggtaatgcagagggggagttctgtaagttccccttcatgttt
atggggaaggagtacaacagctgtaccaatcagggccgtgatgatggattcctctggtgc
tccaccacatacaactttgacgacgacggcaaatacggtttctgtccccatgagttgctg
ttcaccctgggtggaaacgcggacggagctccctgtaagttccccttcacgttccaaggg
gagaactatgatggttgcaccactcaggggcgtgacgacggctaccgctggtgtgctacg
actgagaactatgacaatgacaagtcctacgggttctgccctgaaacagccatgtccacc
gttggaggaaactctgagggttccccctgtgtgttccccttcacgttccttggagacact
tatgacagttgcaccgcctctggacgtagcgacggtaagatgtggtgcgcctccaccaag
agctacgacgacgaccgcaagtggggcttctgtcctgatcaaggctacagtctgttcctg
gttgcggcccatgagtttggccacgccctgggcttggagcactcccaggaccctggtgct
ctgatggcccccatgtacaccttcaccaagaactttagactgtccaacgatgacatcaag
ggcatccaggagctctatggtactggtacagacaagcctgtgcctcccacccagggccca
gtcactcctatggacatctgtaatgaacctgtggtgtttgatgctgtggcccagatcaga
ggagagaccttcttcttcaaggacaggttcatattcaggtcaaccaacttccggggcaag
ccttcaggtcccatgctggtagccacctactggcctgagctcccggtcaccatcgacgct
gcctatgagaacccactggaggagaagactgtgttctttgcaggcaatgagatgtggatc
ttcaatgcagaccagatagagaaaggctaccccaagagaatctcctctataggcctgccc
acagacctgaaaggcattgacgcagccttctcctttggaaagagccagaagacctatctg
ttcgctggagaccagttctggaggtacaatgaagccaagaaaaagatggaccctggcttc
cccaagctcatcgctgactcctggaacggaatcccagacggcattgactctgcctttagt
ctgaatggcatcgattacacctacttcttcaaaggtgcccactacttcaaaatggatgac
agtagcctgaagatcgtcaaactgggcgagattacaaaggactggctgggttgtcactaa
DBGET
integrated database retrieval system
