Oncorhynchus masou masou (cherry salmon): 135552237
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Entry
135552237 CDS
T10723
Symbol
pvrl2l
Name
(RefSeq) PVR cell adhesion molecule related 2 like isoform X1
KO
K06531
poliovirus receptor-related protein 2
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03266
Virion - Herpesvirus
omm04514
Cell adhesion molecule (CAM) interaction
omm04517
IgSF CAM signaling
omm04520
Adherens junction
omm05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
135552237 (pvrl2l)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
135552237 (pvrl2l)
04517 IgSF CAM signaling
135552237 (pvrl2l)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
135552237 (pvrl2l)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
135552237 (pvrl2l)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omm04515
]
135552237 (pvrl2l)
04090 CD molecules [BR:
omm04090
]
135552237 (pvrl2l)
Cell adhesion molecules [BR:
omm04515
]
Immunoglobulin superfamily
Nectin family
135552237 (pvrl2l)
CD molecules [BR:
omm04090
]
Proteins
135552237 (pvrl2l)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
ig
C2-set_2
V-set
Ig_2
I-set
Ig_PVRIG
TM_ErbB1
DUF4342
PycTM
K-cyclin_vir_C
Motif
Other DBs
NCBI-GeneID:
135552237
NCBI-ProteinID:
XP_064839812
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All DBs
Position
13:37264865..37348005
Genome browser
AA seq
520 aa
AA seq
DB search
MARDAKRFPLSPMKNSLLVTAGILLIIQAASCQRVRVVPEVEAYPTESVDLRCQFVDGGN
TKLTQVSWIWEPTEGQRDNIAVFHPIYGESFPDSPFNGRVRFIQGTLTNPSITISSLKMA
DAGRYTCEYATYPSGNEQGTTNLVILAKPKNSASPVVVQASTSGKPVVVAQCEAADGKPA
ATIKWMGEVGGTDNTTSKKGLDGTVTVRSVYLLVPTPEDNGKEVTCMISQRTQDKPQTFP
MKLSVEYPPTVSIVGYDNNWYIGRTDAVLTCKATGNPAPTNVTWTAMSGRMPDTVQIADN
KLIVRKVDEAVNTTFVCEVKNRLGVSKHQVTTAVIEAIVDPSNAGVVAGAIIGSLLALLL
VSSLIAVLVTRSRRQRRGYPGNGEPGAYGNKARLFGGAGNKNEGTGANINGPIYTYRESD
PGALAENVNDFHGPPGSTPTAHDILLSSEMDEAERRKFDALDDSLEEEEERYDSFSVGMV
PAYHIHRHNEEMGGVSMYLDDDDMESQRDGSVISRTAIYV
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggcgagagacgctaaacgtttccccctatcaccaatgaaaaacagtttgttggtgaca
gcagggatacttctgattattcaagctgcttcgtgtcagcgggtgagggtggtaccagag
gtggaggcgtaccccactgagtcggtcgacctgcgctgtcagtttgtcgacggaggaaac
accaagctcacacaggtgtcgtggatatgggagcccacggagggccagagggacaacatt
gccgtctttcaccccatatacggcgagagcttccccgactcgcccttcaacgggcgtgtc
cgcttcatccaaggcaccttgacaaacccctccattaccatcagcagcctcaagatggcc
gacgccgggcgttacacctgcgagtacgccacttaccccagcggcaatgagcaaggcacc
accaatctggtcatacttgcgaaacccaagaactctgcatcccccgttgtcgtccaagcc
agcacaagcggcaaaccagtggtcgtggcccagtgtgaggcggctgacggcaagccagca
gccaccatcaagtggatgggagaagtcggtggcaccgataacaccacctccaaaaaaggt
ctggacggcacggtgacggtgaggagcgtgtacctactggtgcccacgcctgaggacaac
ggcaaggaggtcacctgcatgatcagccagcgcactcaggacaagccgcagaccttcccc
atgaagctgtccgtcgagtatcccccgactgtgtccatagtgggctatgataacaactgg
tacattggccggaccgacgctgtcctgacctgcaaggccactggcaaccctgcccccacc
aacgttacttggacagccatgtccggtcggatgcctgacacggtacagatcgccgacaac
aagctgatcgtgcggaaggtggacgaggctgtgaacaccacctttgtctgcgaggtgaag
aaccggctgggagtgagcaagcaccaggtcaccacggcggtcatcgaagccatagtggac
ccgtccaacgcgggcgtggtggcgggggctatcatcggcagcctgctggccctactgctg
gtcagctcgctgattgctgtcctggtgacccgcagtcgccggcaacggcgcggttacccc
ggcaatggagagcctggcgcctacgggaacaaagcccgcctcttcggcggagctggcaac
aagaacgaaggcacgggggccaacatcaacgggcccatctatacgtaccgcgagagcgac
cccggagcgctggcggagaatgtcaacgacttccacggcccgcctggctccactcccacc
gcccacgacatcctgctgagcagcgagatggatgaggcggagcgcaggaaatttgacgcc
ctcgacgacagcctggaggaggaagaggagcgctacgacagctttagcgtgggcatggtt
ccagcctatcacatccaccggcacaacgaagagatgggaggggtcagcatgtacctcgac
gacgacgacatggagtcacagcgggacgggtcggtcatctcccggactgccatctacgtc
tag
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