Oncorhynchus masou masou (cherry salmon): 135554339
Help
Entry
135554339 CDS
T10723
Name
(RefSeq) sphingosine kinase 1-like isoform X1
KO
K04718
sphingosine kinase [EC:
2.7.1.91
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm00600
Sphingolipid metabolism
omm01100
Metabolic pathways
omm04020
Calcium signaling pathway
omm04148
Efferocytosis
omm04370
VEGF signaling pathway
omm04371
Apelin signaling pathway
Module
omm_M00100
Sphingosine degradation
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
135554339
09130 Environmental Information Processing
09132 Signal transduction
04370 VEGF signaling pathway
135554339
04371 Apelin signaling pathway
135554339
04020 Calcium signaling pathway
135554339
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
135554339
Enzymes [BR:
omm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.91 sphingosine kinase
135554339
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAGK_cat
YegS_C
Tim54
Motif
Other DBs
NCBI-GeneID:
135554339
NCBI-ProteinID:
XP_064842669
LinkDB
All DBs
Position
14:complement(14509473..14528315)
Genome browser
AA seq
555 aa
AA seq
DB search
MDNDIAEPDPSRQRNGVVEGLYGEFTDSLNAKVRYSVSLTESALTIQKISSSPGQDEVVF
HLADCLGCLAYKVEDEADVGAFFTAYFYPFKRRWISTGMARQKVEQCFRVALVQDPLTNL
QEAERWARAIREASIRQIPRRRDVKYYELRRPCRVMVLVNPQSGRGQALQLFSGQIEPML
IEASVPYTLVITEHQNHARDLVRETDLSQWDALVILSGDGLLFEVPKVLNGLLEREDWEE
AIQTPLAILPGGSGNALAASVHHYTKSPPAWGKELLLSCGFLLCKGLVTRLDLVSVHLAS
SQRIFSFLSLAWGFVADVDIESEKYRLVGPMRFLVGTLMRLASLKVYQGRLAYLPAPPFT
PQNSSLCSSLPCGPNSSPNQNSRHNHITNSNHSTNSNHNTAHNSSNIAITTMRTEPQPVN
QKGPPDLLLADLEQPVPDHWTVVNEEDFILVLAMFQSHLAEDLFAAPGATADDGFIHLLY
VRAGISRLALLTLFMTMEKGGHLAIGCPHLVYERVKAFRLEPLSPEGAITVDGEMVEYGP
VQAQVHEGIARLISG
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggataacgacatcgccgaacctgacccatcccggcagcgcaatggtgtcgtggaaggg
ctttatggagaattcacggactcgctcaacgcaaaggtcagatattctgtgagtttgact
gagagtgctctcactattcaaaagatctcatcgtcacctggacaggatgaggtggttttc
catttagctgactgtcttggctgcctggcttataaagtggaggacgaagcggatgttggg
gcgttctttacagcctatttctacccgttcaagaggcgatggataagcacaggcatggcc
cggcagaaagtagagcagtgctttcgggtcgcactggtccaggaccctctcactaatctt
caagaggcagagagatgggcgcgtgccatcagagaggcttctatccgccagataccccga
agacgtgatgtgaagtattatgagctacggcggccctgcagggtcatggttctggtgaac
ccccagagtgggcggggccaggctctccagcttttctccgggcaaatcgagcccatgctc
atcgaggcttcagtcccctacacattggtcatcactgagcaccagaaccatgcgagggac
ctggtgagagagactgatctgtcacagtgggacgctctggtcatcctgtcaggagacggg
ctgctgttcgaggtgccaaaagtgttgaatggtcttctggagagggaggactgggaggag
gccatccagaccccactggccatcttaccagggggctcgggcaacgccctggcagcctct
gtccaccactacactaagtctcccccggcctggggtaaggagctgctgctgagctgtggc
ttcctgctgtgtaaaggcctggtgactcggctcgacctggtctctgtccacctggcctcc
agccagcgcatcttctccttcctctccctggcctggggcttcgtggccgacgtcgacatc
gagagcgagaagtaccgcctcgttggccccatgcgattcctggtgggtacgctgatgcgc
ctggcctccctcaaggtatatcaaggtaggctggcatacctgcctgctcctcccttcaca
cctcagaactcctccctctgctcctctctaccctgtgggcccaacagctcccccaatcag
aactctcgccacaaccacatcacaaactccaaccacagcacaaactccaaccacaacacc
gcccacaactcctccaacattgccatcacaaccatgaggaccgagccccaaccagtcaac
cagaaggggcctcctgacttgctcctagcagacctggagcagccagtgcctgatcattgg
acagtagtgaatgaggaagactttatactggtattggccatgttccagtcccacttggct
gaggacctgtttgccgcccctggggccacagcagacgacggctttatccacctgttgtat
gtgcgtgcaggcatctccaggctagctctgctcacactcttcatgaccatggagaagggg
gggcacctggctattggctgcccacaccttgtgtatgagagggtgaaggcctttcgcctg
gagcctctgtcccccgagggagcgatcactgtggacggggagatggtggagtacgggcca
gtacaggcccaggttcatgaaggaatcgccaggctcatctcaggctga
DBGET
integrated database retrieval system