KEGG   Oncorhynchus masou masou (cherry salmon): 135555565
Entry
135555565         CDS       T10723                                 
Name
(RefSeq) RING-box protein 1
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
omm  Oncorhynchus masou masou (cherry salmon)
Pathway
omm03420  Nucleotide excision repair
omm04110  Cell cycle
omm04114  Oocyte meiosis
omm04120  Ubiquitin mediated proteolysis
omm04141  Protein processing in endoplasmic reticulum
omm04310  Wnt signaling pathway
omm04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:omm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    135555565
   04120 Ubiquitin mediated proteolysis
    135555565
  09124 Replication and repair
   03420 Nucleotide excision repair
    135555565
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    135555565
   04350 TGF-beta signaling pathway
    135555565
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    135555565
   04114 Oocyte meiosis
    135555565
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:omm04121]
    135555565
   03400 DNA repair and recombination proteins [BR:omm03400]
    135555565
Enzymes [BR:omm01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     135555565
Ubiquitin system [BR:omm04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   135555565
  Multi subunit type E3
   SCF complex
    Ring finger protein
     135555565
   Cul2 complex
     135555565
   Cul3 complex
     135555565
   Cul4 complex
     135555565
   Cul7 complex
     135555565
   Cul8 complex
     135555565
   Cul9 complex
     135555565
DNA repair and recombination proteins [BR:omm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      135555565
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      135555565
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 zf-RING_16
Other DBs
NCBI-GeneID: 135555565
NCBI-ProteinID: XP_064844165
LinkDB
Position
15:9810613..9813941
AA seq 108 aa
MAAAMDVDTPSATNSGASKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq 327 nt   +upstreamnt  +downstreamnt
atggcggcagcgatggatgttgataccccaagcgccacgaatagtggagcaagcaagaaa
cgttttgaagtgaagaagtggaatgcagtggcactttgggcctgggacattgtggtggac
aactgtgccatctgtaggaatcacattatggatctctgcattgagtgccaggctaaccag
gcctctgccacatcagaggagtgcaccgtagcctggggagtctgcaatcatgcattccat
ttccactgtatctcccgttggttgaagaccaggcaggtgtgccccctagacaacagggag
tgggagtttcagaaatatggacactag

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