Oncorhynchus masou masou (cherry salmon): 135556249
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Entry
135556249 CDS
T10723
Name
(RefSeq) receptor-type tyrosine-protein phosphatase F-like
KO
K05695
receptor-type tyrosine-protein phosphatase F [EC:
3.1.3.48
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04514
Cell adhesion molecule (CAM) interaction
omm04517
IgSF CAM signaling
omm04520
Adherens junction
omm04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
135556249
04517 IgSF CAM signaling
135556249
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
135556249
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
135556249
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
omm01009
]
135556249
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omm04515
]
135556249
Enzymes [BR:
omm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
135556249
Protein phosphatases and associated proteins [BR:
omm01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
135556249
Cell adhesion molecules [BR:
omm04515
]
Immunoglobulin superfamily
Type II RPTP family
135556249
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
Fn3_VIN3
Fn3_ROS1
Ig_2
fn3_2
ig
Fn3_PBP1
Ig_VEGFR-1-like_5th
Tc-R-P
Interfer-bind
PTP-SAK
DSPc
V-set
Y_phosphatase3
PTP-NADK
PTPlike_phytase
Fn3_PTPRU
Fn3_ELFN
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
135556249
NCBI-ProteinID:
XP_064845352
LinkDB
All DBs
Position
15:complement(40482959..40909577)
Genome browser
AA seq
1903 aa
AA seq
DB search
MAPHHRRSEYPLARGAVLTLLLGCLALPSPSHADSMPSFIKSPDDQTGISGGVASFVCQA
VGDPKPRITWMKKGKKVSSQRFEVIEFDDGSGSVLRIQPLRTHRDEAIYECTAINSVGEI
NTSAKLTVLEEDQIPHGFPTIDMGPQLKVVERTRTATMLCAASGNPDPEISWFKDFLPVD
INSSNGRIKQLRSGGTPIRGALQIENSEESDQGKYECVAVNSAGTRYSAPANLYVRVRRV
PPRFSIPPNNHEVMPGGSVNLTCVAVGAPMPYVKWMMGVVDLTKEEEMPIGRNVLEVTNI
RQSANYTCVAISSLGMIETTAQITVKALPKPPTSLIVTETTATSVTLTWDSGNPEPVSYY
VIQYRAKVSDNGFQEVDGVATTRYSIGGLSPYSEYEFHVMAVNNIGRGPPSSLVDTRTSE
QAPSSPPLAVQARMLSASTMLVQWEPPEEPNGQIRGYRVYYSSDLGAPLSAWHKHNTDDS
RLTTISGLTTDITYSLRVLGFTSVGDGPPSDVLQVKTQQGVPAQPSSFEAEAELDTRIML
SWLWPVQDQITKYELMYWEANSGNKLHVTFPPAGSYAVEGLKPDTLYVFSLAARSEMGLG
VYTQLIEARTAQSTPSAPPQEIVLLSLSSTSIKVSWRAPPAASRHGDIVRYTLAYKAATG
EDLERHEVSDIGADVSSYILEGLEKWSEYQVWVRAHTDVGPGPESPEARIRTKEDVPGAP
PRKVEADALNSTALRVMWKPPLQVKQHGQIRGYQVVFSRLENGAPRGQPNIMDVSLPEAQ
ETVITGLLPETTYSVTVAAYTTKGDGARSKAKVVTTTGAVPGRPTMMISTTIGNTALIQW
QPPKEMVGEHMGYQLQYKRMEEESFTVKDFKKIEDHFTVTGLHKGATYIFKLCAKNRVGN
GEEYTKEITTPDDVPSSYPQNLSVVGLTTTTTKLAWEPPVLAERNGKIVQYIVVYRDINS
QQNHTNSTTETQMTIMGLQPDTTYDIRIRAFTSKGGGPISPSIQSRTMSTAMPEFTKNFG
VKAVMKTSVLLTWEVPETYKSQVPFKILYNQQSVEVQGNLKRKLITRLQPDTDYSFVLMS
RGNSAGGLQQQVSIRTAPDLLKTKPIQYQHNPEEGGKLTITLPKVPTTAPVRYYYIVVVP
VTPATLHRWENPEDMDLDELLEASSDQSLKRRQTQEFLRPYIAAKMDALPDTFPLGDEKK
YNGFYNKPLPGQQQYLCFVLAALKGHESQKTFAASPYSDPITVKLHSGMARHAEDPEMLW
VMGPVLAVVLIIIIVIAILLFKRKRASPSAKDEHSVGVKDSLLAHSSDPVEMRRLNYQTQ
GMMEHPFISTTDLANHIERLKANDGLRFSQEYESVDPGQQFTWEHSNLEVNKPKNRYANV
IAYDHSRVILTSVDGVPGSDYINANYIDGYRKQNDYIATQGPLPETLSDFWRMVWEQRTN
TIVMMTRLEEKSRVKCDQYWPSRGTETYGMIQVTMLDTVELATYSVRTFTLYKNGSSEKR
EVRQFQFMAWPDHGVPEYPTPTLAFLRRVKACNPTDAGPMVVHCSAGVGRTGCFIVIEAM
LERMKHEKSVDIYGHVTCMRAQRNYMVQTEDQYVFIHEALLEAATCGNTEVPARNLYAHI
QKLTQVTPGGTVSAMELEFKKLSNSKAHTSRFISANLPCNKFKNRLVNIMPFESTRVYLQ
PIRGVEGSDYINASFIDGYRQQKAYIATQGPLAETTEDFWRMLWEHNSTIVVMLTKLREM
GREKCHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKVTDARDGQSRTIRQFQFTDWP
EQGVPKTGEGFIDFIGQVHKTKEQFGQDGPISVHCSAGVGRTGVFITLSIVLERMRYEGV
VDIFHTAKTLRTQRPAMVQTEDQYQLCYRAALEYLGSFDHYAT
NT seq
5712 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgcaccacagacggtcagaatatcccctcgccaggggggccgtgcttaccctg
ctcctgggctgtctggccctgccatcaccatcccatgcagacagcatgcccagtttcatc
aagtctccagatgaccagacaggtatttcgggaggcgtggcatccttcgtatgccaggcg
gtgggcgatcccaagccacgcatcacttggatgaagaagggcaagaaagtcagctctcag
cgctttgaggtgatagagtttgacgacggctcagggtccgtcctgcgtatccagcccctg
aggacccacagggacgaggccatctatgagtgtactgccatcaacagtgtgggagagatc
aacaccagcgccaaactcaccgtcctggaagaggaccagattccccatgggttccccacc
atagatatgggaccccagctgaaggttgtagagcggacccgtacagccaccatgctgtgt
gctgccagtggcaaccccgacccagagatctcctggttcaaggacttcctccctgtagat
atcaacagcagcaacggaagaatcaaacagctccgctcaggtggtacaccaatcagagga
gctctccaaatagaaaacagcgaggagtcggaccagggaaagtatgagtgtgtggcggtc
aacagcgccgggacccgctactcggctccagccaacctatatgtgagagtgaggcgtgtg
ccaccccggttctccatccctcccaacaaccacgaggtgatgccgggtggcagcgtgaac
ctgacgtgcgtggcggtgggtgcacccatgccctacgtcaagtggatgatgggggtggta
gacctgactaaggaagaagagatgcccattgggaggaatgttttggaggtcaccaacatt
cgccagtctgccaactacacctgcgtggcgatatcgtcgcttggtatgatcgagaccact
gcacagatcaccgtcaaagccctgcccaagccccccacctccctgattgtgactgagacc
acagccaccagcgtcactctgacctgggactccgggaaccctgagcctgtgtcctactac
gtcatccagtaccgggccaaggtctctgacaacggcttccaggaggttgacggagtagcc
accacccgctacagcatcggagggctcagcccctactctgagtatgagttccacgtcatg
gcggtgaacaacattgggcgtggccctcccagcagcctcgtggacaccagaaccagtgag
caggctccctcctctccaccgctggctgtacaggctcgcatgctcagcgcatccactatg
ctggtccaatgggagcctcccgaggagcctaatggacagatcagaggttaccgggtgtac
tacagctctgacctcggagccccgctgagtgcgtggcacaaacataacactgatgacagc
agactgaccaccatctcagggttgaccacagatatcacctacagcctcagggtgctgggg
ttcacttctgtaggggacggacctccgtctgatgtactgcaggtcaaaacccagcaggga
gtaccagcccagccgtctagcttcgaggcagaggcagagttggacacccgcatcatgttg
tcgtggctgtggcctgtccaggaccagatcaccaagtacgagctcatgtactgggaggct
aactctggcaataagctccacgtgaccttccctccagcggggtcctatgctgtggagggt
ctgaagccagacaccctctacgtgttctccctggctgctcgctctgagatgggtcttgga
gtctacacccaacttattgaggccaggactgcccagtccaccccctcagccccaccccag
gagatagtcctgctaagcctcagctccaccagcatcaaggtgagttggagagcgccccct
gcagccagccgccatggggacatcgtccgctacacactggcctacaaggccgcaactgga
gaggacctggagcgccacgaggtgtcggacatcggggcagacgtctctagttacatactg
gagggcctggagaagtggtcagaataccaggtgtgggtcagggctcacacggacgtaggc
ccaggcccagagagcccggaagcccggatcaggaccaaggaggatgtgcccggagcccct
cccaggaaggtggaggctgatgccctgaactctacagccctgagggtgatgtggaagccc
cccctccaggtgaaacaacatgggcagatcagggggtaccaggtggtcttctcacgactg
gagaatggagcgccacgaggccagcccaacatcatggacgtctccctacccgaggcacag
gagactgtcataacaggcctgctccctgagaccacctactctgtcactgtggcagcctac
accaccaagggagatggggcacgcagtaaggccaaggtggtcaccacaacaggagcagtc
ccaggcaggcccactatgatgatcagcaccaccatcggtaacacagccctcatccagtgg
caacctccgaaggagatggtgggagagcacatgggctaccagctgcagtacaaacgcatg
gaggaggagtcgttcaccgtaaaagacttcaagaagatagaagaccacttcaccgtcacc
ggcctgcacaagggcgccacctacatcttcaagctctgtgccaaaaaccgtgtgggcaac
ggggaggagtacacaaaggagattaccacaccagacgatgtgcccagtagctacccccag
aacctgagcgttgtgggcctgaccaccaccacaaccaagctggcctgggagcctccggtg
ctggctgagaggaacgggaagattgtccagtacattgtggtgtacagagatatcaacagc
cagcagaaccacaccaacagcacgacagagacccagatgaccatcatggggctgcagcct
gataccacctatgatatcaggatcagggcattcaccagcaagggagggggaccaatcagt
cctagtatacagagcaggaccatgtctaccgccatgccagagttcaccaaaaactttggt
gtgaaagccgtgatgaagacgtcagtgctgctgacttgggaagtgccagaaacatacaag
tctcaagtgcctttcaaaatactgtataaccagcagagtgtggaggtgcaggggaacctg
aagaggaagctgatcacgaggctgcagccagacacagactacagctttgtgttgatgtct
agagggaacagtgctgggggtctacagcagcaggtctccatcaggaccgccccggacctg
ctcaagaccaaacccatccaataccaacacaacccagaggagggaggcaagctcaccatc
accctgcccaaagtccccaccaccgcccctgtcagatattactacatagtggtggttcct
gtcacaccagccacactacacaggtgggagaaccctgaagatatggacttggatgagctc
ctggaggctagttctgaccagagcctgaagaggagacagacccaagagttcctcagaccc
tacattgctgccaagatggatgctctcccagacaccttccctctaggagacgagaagaag
tacaacggcttctacaacaagcctctaccgggccagcagcagtacctctgtttcgtcctg
gctgccctcaaaggccacgaatctcagaagacgtttgcggccagcccatactcggacccc
atcacagtgaagctccacagcggtatggctcgccatgctgaggacccagagatgctgtgg
gtcatgggccctgtcctggccgtcgtactcatcatcatcatcgtcatcgctatcctgctc
ttcaagaggaaacgagcatctccctctgccaaggatgagcactctgttggggtgaaggac
tctctgctggcccactcctctgaccctgtggagatgagacgacttaactaccagacacaa
gggatgatggagcaccctttcatctccaccactgatctggctaaccacatcgagcgactt
aaggccaacgacggactccgcttctcacaggagtatgagtccgtagaccctggccagcag
ttcacgtgggaacactctaacctggaagtaaacaagccaaagaaccgctatgcaaatgtc
atcgcctacgaccactccagggtcatcctcacctccgtcgacggagtgccaggtagcgac
tacatcaacgctaactacatagacggctacaggaagcagaacgactacatcgctacacag
ggcccgcttcctgaaaccctgagtgacttctggaggatggtgtgggagcagaggaccaac
actattgtcatgatgaccaggctggaggagaagtcaagggtgaagtgtgaccagtactgg
ccaagtcgggggacagagacctatgggatgatccaggtgaccatgttggacactgtggag
ctggctacctatagcgtacgcaccttcaccctctataagaatggctccagtgagaagaga
gaggttcgtcagttccagttcatggcctggccggaccatggagtgcctgagtaccccacc
cccaccttggccttcctgcgcagggtcaaggcctgcaacccgacagatgcagggcccatg
gtggtccactgcagtgctggtgtagggcggaccggttgcttcatcgtgatcgaagccatg
ctggagcgtatgaagcatgagaagtctgtggatatctacggtcatgtgacgtgtatgaga
gctcagaggaactacatggtgcagacggaggaccagtacgtcttcatccacgaggccctg
ctagaggcagccacctgcggtaacacagaggtccctgcacgcaacctgtacgcacacatc
cagaagctcacccaggtcacgcccggaggcaccgtttccgccatggagctagagttcaag
aaactgtctaactcgaaagcacatacctcaagattcatcagcgccaacctcccctgcaac
aagttcaagaaccggctggtgaatatcatgccttttgagtccacccgcgtgtatctgcag
cctatcagaggtgtggagggctccgactacattaacgccagcttcatcgatggatacagg
caacagaaggcctacatagccacccagggcccgctagcagagaccacagaggacttctgg
aggatgctgtgggaacacaactctaccatcgtcgtcatgctcaccaaactcagagagatg
ggacgggaaaagtgccatcagtactggcctgctgagcgctctgctaggtaccagtacttt
gtagtggaccccatggctgagtacaacatgccccagtacatcctccgagagttcaaggtc
acagacgccagggatggccagtccaggaccattcggcagttccaattcactgattggcca
gaacaaggggtgccaaaaactggagagggctttatcgacttcattggccaagtgcataaa
accaaggaacagttcggacaggatggacccatctctgtgcactgcagtgctggagttggg
cggactggtgtgttcatcaccctgagtatcgtgctggagaggatgaggtacgagggggtg
gtggacatcttccataccgccaaaacactgaggacccagagacctgccatggtgcagaca
gaggaccagtaccagttgtgctacagggcagctctggagtaccttggcagctttgaccac
tatgcaacataa
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integrated database retrieval system
