Oncorhynchus masou masou (cherry salmon): 135556690
Help
Entry
135556690 CDS
T10723
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase-like
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
135556690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
omm03400
]
135556690
Enzymes [BR:
omm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
135556690
DNA repair and recombination proteins [BR:
omm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
135556690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
135556690
NCBI-ProteinID:
XP_064846148
LinkDB
All DBs
Position
15:complement(66263433..66277080)
Genome browser
AA seq
456 aa
AA seq
DB search
MEEKLYGSVPVPSEYLQQWIQSAQQLQALQGQYPGINHHHSPHPHYTEEPREERVMAHSH
MVVNDELMAQQEPANLAKAPAKKRGRTAQPKEPKPPKMPKPPKAKPGPKPKKGKEGQVAD
STQEKMDETVQKVRKKRDRFKGMTEDEVMSRTLTDILDYNLDYVIIGINPGLVAAYVGRW
FPGPGNHFWKCLFLSGFTDEQLNHMSDTSLPEKYKIGFTNMVARTTPGSKDLSTKELREG
ALILVEKLKKYKPLIAVFNGKCIYEMFCREMFGKKPKKLDFGLQPHKIPDCEVALYLMPS
SSARCAQFPRAQDKVHFYIKLRELRDQLRGVARTDDIQELEYTFDLGLAKEDAKRMAIKE
EAYDPGYEAAFGGAYGEGGPGPEEGQSNGNGHCNFSSAENTVSDAVEKADPSQLPAATAA
ATEGQLPDGQWMMQSFADQIPDIGGSKEPQAWAGNV
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaagctgtatggatcagtgcctgtcccctcggaatatcttcaacagtggatt
cagtcagctcaacagcttcaggctctgcagggccagtatccgggcatcaaccatcaccac
agtcctcaccctcactacacagaggaaccaagagaagagagagtaatggcacattcacat
atggttgtcaatgatgagctcatggctcagcaagaacctgccaacttagcgaaagctcca
gcgaaaaagcgagggagaacagcacaaccaaaggaacccaagccccccaaaatgcccaag
ccccccaaggccaaaccgggccccaagcccaagaaaggcaaggagggtcaagtggctgac
agcacgcaggagaagatggacgagaccgtccagaaggtcaggaagaaacgagaccgattc
aagggcatgacggaagatgaggtcatgagcagaactctgactgacatccttgactacaac
ttggactatgtcattattggaatcaacccaggtctggtggcagcctatgttggacgatgg
ttccctggtcctggaaaccatttctggaagtgcctgttcttgtctggattcactgatgag
cagctcaaccacatgagtgacaccagcctgccagagaaatataagattggtttcaccaac
atggtggcaaggaccacgcctggaagcaaagacctttcaaccaaagagctacgtgagggt
gccttaattcttgtggaaaagctgaagaagtacaagcctctcatagctgttttcaatgga
aaatgtatctatgaaatgttctgcagagagatgtttggaaaaaagcccaagaaacttgac
tttggtctgcagccacacaagatacctgactgtgaagtggcgttgtatttgatgccgtcg
tccagtgcccgctgtgcccagttcccccgtgcccaggacaaagtgcacttctacatcaag
ctgagggaattaagggaccagctcaggggtgtggccagaacagacgacattcaggagttg
gagtacacctttgacctgggattggccaaggaggacgccaagaggatggcgattaaagag
gaggcgtacgacccgggctacgaggcggcctttggcggcgcatatggcgagggtgggccg
gggcctgaagagggccagagcaacggcaatgggcactgtaacttctcgtcggcggaaaac
acagtttcagacgctgtcgagaaggcagacccttctcaacttcctgccgccaccgccgct
gccacagagggacaactcccggacggacagtggatgatgcagtcttttgctgatcagatt
ccagacattgggggctctaaagagccccaggcatgggcgggcaatgtataa
DBGET
integrated database retrieval system
