Oncorhynchus masou masou (cherry salmon): 135557782
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Entry
135557782 CDS
T10723
Name
(RefSeq) otoferlin-like isoform X1
KO
K19949
otoferlin
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
Membrane trafficking [BR:
omm04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
135557782
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
135557782
NCBI-ProteinID:
XP_064847453
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All DBs
Position
16:27767363..27892158
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AA seq
2061 aa
AA seq
DB search
MVLLVHLKTVRDLRGKGDRIAKVTFRGLSFYTRVLENCEDEARFDEMFRWPIASRVDENE
ILELQVFNYSKIFTNRVIGTFRMVLQKVAEEGHLEVTDTLIDDNNTAIRTSVTVDIKYTT
MDGTVGVWSDGEFLDVPGDPEGTFQFETDSLLSGHSHGSGSGVSPGRSIHGIPTFRKAGK
GVFSAMKLHKTKSSREDHKKDEPATLDMEDLDRKALRLGGFGGLDPDCISLASVTAVTTN
VSNKRSKPDIKMEPSSGRPVDYQISITVVEARQLVGLNMDPVVCVEIGEDKKYTSMKEST
NCPYYNEYFVFDFHVPPDVMFDKILKLSVIHSKNLLRSGTLVGTFKLDVGTVYSQPEHQF
YHKWAMLSDPDDITAGCKGYIKCDIAVVGKGDNIKTPHKANETDEDDIEGNLLLPEGVPL
ERQWARFYVKIYRAEGLPKMNTSIMANVKKAFVGENRDLVDPYVQVVFAGQRGKTSVQKS
SYEPIWNEQVVFTEMFPPLCKRIKVQIRDSDKVNDVAIGTHFIDLRKIANDGDKGFLPTM
GPAWVNMYGSTRHYTLIDEHQDLNEGLGEGVSFRARLLISVAVEILDTTSTEIVSSTEVQ
VEPVSNISESATGKIEEFFLFGSFLEATMIDRKIGDKPISFEVTIGNYGNQIDGVSKPTA
AKKKKKKEGGGESDEEESELIQQNSSEDEADDDGDLVSVSSTPPMKPVITDRNYFHLPYF
EKKPCIYIKSWWQDQRRRLYNSNIMDKIADKLEEGLNDVQEVIKTEKAYPERRLRGVLEE
LSTGCNRFVTLANKDQNQAGRTKLDKERLKSCMREMESMGQQAKLIRSQVKRNTVRDKLK
MVQNFLHRLRFLADEPQHSIPDVFVWMMSNNKRIAYARIPSKDILYSIVDEETGKDCGKV
KAVFLKLPGKKGFGPAGWTVQAKMELYLWLGLNKQRKDFLSGLPNGFEENKAPRTSPCLQ
SVPPVSLVYNMKQVFQLRAHMYQARSLFAADSSGLSDPFARVFFSTHSQVTEVLSETLCP
TWDQLLVFEDVELFGEAGELRDDPPIIVVEVYDQDTVGKAEFIGRTFAKPITKMCDEHYG
LPRFPPQLEYYQIYRGNSTAGDLLAAFELLQIPYDDEEIRRALIAVHDFAVPQIKIGQGG
RAELPPIDGPTDSERGPILPVPMGIRPILSRYRIEVLFWGLRDLKRVNLALVDRPRVDIE
CAGRGVQSALIQNYKKNPNFSTLVKWFEVDLPENELLHPPLNVRVVDCRAFGRYTLVGSH
AVTSLRRFIYSPPDKTHNNWASAARLMNGYMVLTNGGSQSRPCSPYSRTPPRTLSRPAGD
VTVNMDADPSVRKMDTVVKLDATSDAVVKVDANEEKEEKKKKKKKKKGEVEEDDETDESM
LDWWSKYFASIETLMEILRAQEAALAEAEEREDQEIAAEGADIKPDDLPVKGSKGKEKSR
DKSRNKEKKKSHHAGEETEKHSSKPKVDELLVYNKELEAEYDNFEDWLHTFNLYRGKAGD
DDEAALDDDRIVGRFKGSMCMYKLPLSEEITREVGFDPNMGMFQSIPHNDPINVLVRVFV
VRATDLHPADVNGKADPYVVIKLGKSELKDKENYISKQLNPVFGKAFDMEATFPMESMLT
VSVYDWDLVGTDDLIGETKIDLENRFYSKHRATCGIANSYSVHGYNVWRDPMKPSQILAK
LCKEGKLDGPHYGPGGRVKVANRVFMGATEIEDENGLKKQTDEHLALTVLKHWEEIPRVG
CKLIPEHVETRPLLNPDHPGIEQGRIEMWVDMFPMDMPAPGPAIDISPRKPKKYELRVII
WNTDEVILEDDDYFTGEKSSDIFVRGWLKGQQEDKQDTDVHYHSLTGEGNFNWRFVYPFD
YLMAEEKIVISKKESMFSWDETEYKIPARLTLQVWDADHFSADDFLGAIELDLNRFPRGA
KTAKQCSINMVQNQAELPCISIFKQKRVKGWWPFVARDENDEMELTGKVEAELHLMSAEE
AEKSPVGLGRNEPDPLEKPNRPNTSLSWMLSPVRVVCILVWRQYKLHCALLLGAVLGLLF
LGLLFFSLPSALSYKIFNVAG
NT seq
6186 nt
NT seq
+upstream
nt +downstream
nt
atggttcttttagtccacctaaaaacagtccgggaccttcgtggaaagggggacagaatc
gccaaagtcacatttcgaggtctgtcgttctacacacgtgttctggagaactgtgaggat
gaggccagatttgatgagatgttccgatggccgatcgccagtagagtggatgaaaacgag
atactggagcttcaagtgttcaactacagcaaaatcttcaccaacagagtcattggaacc
ttccggatggttctacagaaggtggcggaggaggggcatctggaggtgacagacacactc
atcgatgacaacaacaccgccatacggactagtgttactgtagacatcaagtacacgacc
atggatgggacagtgggggtgtggagcgatggggaattcctggatgttccgggcgaccca
gagggaacgttccagtttgagacagacagcctgctttccggacacagccatggatcagga
tcaggagtgtctcctggacgatccatccacggaattcccactttcaggaaagcagggaaa
ggggtattctcagccatgaagctccacaagaccaagagctccagagaggaccacaagaaa
gatgagccagccaccctggacatggaggatctggacaggaaggccttgcgtctgggaggg
tttgggggtctggacccagactgcatctccctggcgtccgtcaccgctgtcaccaccaat
gtctccaacaagaggtcaaagcctgatatcaagatggaacctagttctgggaggcctgtg
gattaccagattagcatcacagtggtcgaggccaggcagctggtaggcctaaacatggac
cctgtggtctgtgtggagattggggaagacaagaagtacacctccatgaaggaatccacc
aactgcccctactacaatgagtattttgtctttgacttccacgtcccaccagatgtcatg
tttgacaagatcctcaagctctcagtgatccactccaagaacctgctgcggagtggcacc
ttggttggcaccttcaagctagatgttggcacagtctactcccagcctgagcaccagttc
taccacaagtgggccatgctgtctgacccggatgacatcacagcggggtgcaaaggttac
atcaagtgtgacatcgccgtggtggggaagggggacaatatcaagactccccacaaagcc
aatgagacagatgaagacgacatagaggggaacctcctgcttccagagggagttccgttg
gagaggcagtgggcgcggttctacgtgaagatctaccgagcggagggccttcccaagatg
aacaccagcatcatggccaatgtgaagaaggccttcgtaggggagaacagagacctggtg
gacccctacgtacaagtggtcttcgctggacagagagggaagacttctgtccagaagagc
agttatgagcccatctggaacgagcaggtggtcttcactgagatgtttcctccgctctgc
aaacgcatcaaggtccagatacgagactctgacaaagtcaatgacgttgccataggaacg
cacttcattgacctgcgaaagatcgccaacgatggtgacaaagggttcctccccaccatg
ggcccagcctgggtcaacatgtatggctcaacccgccactacactctgattgatgagcac
caggacctgaatgaggggctgggggaaggtgtgtccttcagggcccgcctcctcatctct
gttgccgttgagatcctggacaccacctccactgagattgtgagctccaccgaggtgcag
gtagagcctgtctccaacatctcagagagtgccacagggaaaatagaggaattcttccta
tttggttccttcctggaggccaccatgattgacaggaagatcggcgataagccaatcagt
ttcgaggtcacaataggtaactacggcaaccagatagacggagtgagcaagcccaccgca
gctaagaagaagaagaagaaagagggaggaggagagagtgatgaggaagagtcagagctg
attcagcagaactccagtgaggacgaggcggatgatgatggggacctggtgtctgtgtcc
tccacccctcccatgaaacctgtcatcacagacaggaactacttccacctgccctacttt
gagaagaagccatgtatctacatcaagagctggtggcaggaccagaggagacgactctac
aactcaaacatcatggacaagatcgctgacaaactggaggagggtctgaatgacgtgcag
gaggtcattaagacagagaaggcctatccagagcgtagactccgaggggtgctggaggaa
cttagcactggctgcaatcgtttcgtcactttggccaacaaagaccagaaccaggcaggc
agaactaaactggacaaagagagactcaagtcctgcatgagagaaatggagagcatgggg
cagcaggccaagctgattcgctcccaggtgaagaggaacacggttagagacaaattgaag
atggttcaaaacttcctgcacaggctccgtttccttgccgacgagccccagcacagtatc
ccagacgtgtttgtatggatgatgagtaacaacaagcgtatcgcctacgcccgcatcccc
tccaaagacatcctctactccatcgtagacgaggagacaggcaaggactgtggcaaggtc
aaagctgtcttcctcaagctgcctggtaagaaggggtttggtccagcgggttggacagtg
caggctaagatggagttatacctgtggctgggtctcaacaaacagaggaaggacttcctg
tctggcctgcccaacggctttgaagagaacaaggctcccaggacaagcccctgtctacag
tctgtaccccccgtcagtctggtttacaacatgaagcaggtattccagctgagggctcac
atgtaccaggccaggagtctgtttgctgcagacagcagtggcttgtcagacccctttgcc
agggtattcttctccacacatagccaggtcactgaggtcctgagtgagactctgtgccct
acgtgggatcagctgctggtgtttgaggatgttgagctgttcggagaggccggcgagcta
cgagacgacccgcctatcattgtggtagaggtctacgaccaggacactgtgggcaaggca
gagttcattggtcggacatttgctaagcccatcactaagatgtgtgacgagcactacggc
ctcccgaggttccccccacagctagagtactaccagatctaccgtggtaactctaccgcc
ggtgacctactggctgcctttgagctgctgcagatcccctatgacgatgaggagatcagg
agggctctgattgctgtccatgactttgctgttcctcagattaagattggacaagggggg
agggcagagcttcctcccatcgatggtccgacagactcagaacgtggacccatcctccct
gtacccatgggcatccgacctatcctcagccgctaccgcatagaggttctgttctggggc
ctgagggacctgaagagggtgaatttggccctggtggacagacccagggttgacatagag
tgtgcagggagaggagtccagtctgctctcattcagaactacaagaagaaccccaacttc
agcaccctcgtcaagtggtttgaggtggacctgccagagaatgagctacttcaccctcct
ctgaacgtccgggtggtggactgcagagcgtttggccgctacaccctggtgggttcccat
gccgtcaccagcctgcgacgcttcatttacagccccccagacaagacacacaacaactgg
gccagcgcagctagactgatgaatggctacatggtcctgaccaacggggggtcccaatct
cgcccctgctccccttactcccgcaccccaccccgcaccctctctcgccccgcaggtgat
gtcacagtcaacatggatgccgacccctcagtcaggaagatggacacggtggtcaagtta
gacgctacgtctgatgcagttgttaaagttgatgcgaacgaggagaaagaagaaaagaag
aagaagaagaagaagaagaagggagaggtggaggaggacgatgagacagacgagagcatg
ctggactggtggtccaaatattttgcttccatagagacactgatggagatcctcagggct
caggaggcagctctggccgaggcagaggagagggaggaccaggagatagcagcagaggga
gcagatatcaaacctgatgacctccctgtaaaaggctccaaggggaaggagaagagccga
gacaagagcaggaacaaggagaagaagaagagccaccatgcaggagaggagacagagaaa
cactccagcaaacccaaagtggacgagctgctggtgtacaacaaggagctggaggcagag
tatgataactttgaggactggctccacaccttcaacctgtacagagggaaggcaggggac
gacgatgaagcagccctggatgacgacaggatcgtgggcagattcaagggctccatgtgc
atgtacaagttgcctctgtctgaggagatcacccgggaggtgggctttgacccaaacatg
ggcatgttccagagcattccacacaatgaccctatcaacgtgctcgtgcgcgtcttcgtg
gtcagggccacagacctccaccctgctgatgtgaatgggaaagcggacccctatgttgtc
atcaaactgggcaagtcagagctgaaggataaagagaactatatctccaaacagctcaac
cctgtctttggcaaggcatttgacatggaggctacgttccccatggagtccatgttgacc
gtgtcagtgtatgactgggatctggtgggcactgatgacctcatcggggagaccaagatc
gacctggagaaccgcttctacagtaaacacagagctacctgtggcatcgctaacagctac
tctgtacatggttacaatgtgtggcgtgacccgatgaagccaagccagatcctggccaag
ctgtgtaaggagggcaagctggacggcccccactatggtcccgggggcagggtcaaggtc
gccaaccgcgtcttcatgggtgccacagagatcgaggatgaaaatggtctgaagaagcag
acagacgagcacctggccctgacggtgctgaagcactgggaggagatccccagggtgggc
tgtaaactcatcccagaacacgtggagacaagacccctactcaaccctgaccaccctggc
attgagcaggggaggattgagatgtgggtagacatgttccccatggacatgccagcacct
ggacccgccatcgacatatcaccacgtaaaccaaagaaatatgagctcagggtgattata
tggaatacagacgaagtaatactggaggacgatgattacttcactggggaaaagtccagt
gacatatttgtcaggggctggctgaagggtcaacaggaggacaagcaggacacagacgtc
cactaccactctctgacgggcgaggggaattttaactggcgcttcgtgtaccccttcgat
tacctgatggctgaggagaagatcgtcatctccaaaaaggagtccatgttttcctgggac
gagaccgagtacaagatccctgcacgcctcaccctgcaggtctgggatgctgaccacttc
tccgctgatgactttctaggtgcgatagagctggacctgaacaggtttccccgcggggcg
aagacagccaagcagtgttctataaacatggtccagaaccaggcagagctgccctgcatc
tccatcttcaaacagaagagagtcaagggctggtggccattcgtggcccgcgatgagaac
gacgagatggaactcacgggtaaagtggaggcggagcttcatctcatgtcggcagaggag
gcggagaaaagtcctgttggtcttggacgcaatgagcctgaccctctggagaaaccaaat
cgtcccaacaccagtctgtcgtggatgctgagcccggtgcgtgtagtgtgtatcctagtc
tggaggcagtacaagctgcactgtgctctgctgctgggggccgtcctgggacttctgttc
ctgggcctgctcttcttctccctcccttctgccctcagctacaagatcttcaacgtcgct
ggctga
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