Oncorhynchus masou masou (cherry salmon): 135558807
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Entry
135558807 CDS
T10723
Name
(RefSeq) ranBP-type and C3HC4-type zinc finger-containing protein 1-like isoform X1
KO
K20894
shank-associated RH domain-interacting protein
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04217
Necroptosis
omm04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
135558807
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
135558807
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omm04121
]
135558807
Ubiquitin system [BR:
omm04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
LUBAC complex
135558807
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Gene cluster
GFIT
Motif
Pfam:
Sharpin_PH
Zn_ribbon_RanBP
ubiquitin
Motif
Other DBs
NCBI-GeneID:
135558807
NCBI-ProteinID:
XP_064849018
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Position
17:28971259..28976370
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AA seq
440 aa
AA seq
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MALSSGGWGKPPVPAPSQSVHGGPALANCNTVLMSVRVSVCHSGIRPLCLPGAGDEALRL
QLSMDPSKAGEFRLALRDISGSGRSVFIAEFDLRSVQYEVKSPCLHEMRLATPPHDCIRF
NFRCDLEAEQWATVVMSSLREAHRVAVNSSPHPMDDRQQHATAALEQRSTASLPLTEELC
LELARAIEAGDSQGAAQHASALARQKAVLTIQLSEKCYAEGEISLSVAVEDISSSCCVTV
KVFPHMTVAALKQQVFLEYGFHPRVQRWVIGQCLCTEPRSLASYGVQRDGDTAYLYLVSA
RHARLTRQLFQQDQEGAHLTPPPPTSNGPLSQDWRGYSTLPSRLSHNTQGSTGSGAERLA
TSEIRDALNLEKLHLKDKPDKPSKASKTQTEWACPSCTFINKPTRPGCEICSTARPDSRK
HSRIQQEKGRREEQISALSS
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggcactgagttctggcggttggggtaaaccgcctgtgccagccccgtcccagtctgta
catggcgggcccgcgctggctaactgcaataccgttttgatgtcggtacgggtgtcggtt
tgccattcgggtattcgaccgctttgcctccctggagctggtgatgaggctctccgtctt
caacttagcatggaccccagcaaagctggagagtttcggctagcactgagggacattagc
ggaagcggccgtagtgtgttcattgcggagtttgacctgcgctctgtgcagtatgaggtc
aagtccccatgccttcacgagatgcgcttggccacaccccctcatgactgtatccgcttc
aacttccgctgtgacctggaggctgagcagtgggccactgtggtgatgtcatcactaaga
gaggcacacagagttgctgtaaatagttccccacatcctatggatgaccgacagcagcac
gcaaccgcagctctagaacagcgcagcacagcctccttaccactcactgaggagctgtgc
ttggagcttgcccgggcgatcgaggcaggtgacagccagggtgctgctcagcacgcatct
gctttagctcgtcagaaggcagtgctcactatccaactgtctgagaagtgttacgccgaa
ggagagataagtttgtctgtggcagtggaagacatctcctcttcctgttgcgtcacagtg
aaagtatttccccacatgactgtcgcagcactcaagcagcaggtgtttttggagtatggc
tttcaccctcgcgtgcagcgctgggtgattggacaatgcctgtgcacagagcctaggtcc
ctggcctcgtatggggtccagagggatggggatacggcctacctttacttggtctcagcc
cgccatgcccgcctcacccgccaactattccagcaggaccaggagggtgcccacctcacc
ccacctccgcctaccagcaacgggcctctttcccaggactggaggggctacagcaccctg
ccctccaggcttagccacaacacccaggggagcaccggaagtggggccgagaggttggct
acgagcgagatacgagacgccctcaacttggagaagctgcatcttaaagataaacccgat
aagcccagcaaagccagtaaaacacagaccgaatgggcgtgtccctcctgcaccttcatc
aacaagcctacccgaccaggctgtgagatctgcagtacagccagacctgactcacgcaag
cacagccgcatacaacaggagaaaggaagaagagaggagcagatcagtgcattgagcagt
taa
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