Oncorhynchus masou masou (cherry salmon): 135559389
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Entry
135559389 CDS
T10723
Symbol
scn4aa
Name
(RefSeq) sodium channel protein type 4 subunit alpha A
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
omm04040
]
135559389 (scn4aa)
Ion channels [BR:
omm04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
135559389 (scn4aa)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
IQ
GPHH
IQCJ-SCHIP1
ATP-synt_B
Motif
Other DBs
NCBI-GeneID:
135559389
NCBI-ProteinID:
XP_064849620
LinkDB
All DBs
Position
18:53567955..53607249
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AA seq
1910 aa
AA seq
DB search
MAPLLPPTGADAFRRFTPESLAEIERLMEEKRIAAEVEGDGPSEPSKDLEAGKSLPMIFG
DAPTEMLNTPLEDIDPFYKAQKTFIVITKGNTIFRFNAESACYILSPFNHLRRGAIKILI
HSFIMITILSNCFFMTMSDPPSWSKTVEYVFTGIYTFEASCKVLSRGFVVGPFTFLRDPW
NWLDFMVISMAYVTEFVDLGNVSALRTFRVLRALKTITVIPGLKTIVGALVQSVKKMVDV
MILTVFALAVFALIGLQLFMGNLRNKCVRWPILNSTVFDDYNSTSSLDATMGFGETSNST
VPVDFKEYISNIENHYYLEGSLDALLCGNSSDAGKCPEGFTCIKAGRNPNYGYTSYDSFG
WAFLSLFRLMTQDYWENLFQLTLRAAGKTYMIFFVLVIFLGSFYLINLILAVVAMAYDEQ
NEATLKEAQDKEEEFQRLLEQYRIQEQADAAAGSQATLTSRKELSHHSGSYGGSADDEQS
LGDDVIKDCNGRIVPRLAIVPVSSESESVPEDELKEDSMFHLEQPGLKNRSASAVSVLTT
VMEELEDAQKPCPPGWYKFADIFLKWDCCVPWVWLKKWLLFIVMDPFVDLGITICIVLNT
LFMAMEHYPMSPEFDHMLSVGNLVFTGIFTAEMVFKLCAMDPYYYFQVGWNIFDSIIVTF
SLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVF
IFAVVGMQLFGKSYKECVCKIATDCELPRWHMHDFFHSFLIVFRILCGEWIETMWDCMEV
AGAGMCLVVFMMVMVIGNLVVLNLFLALLLSSFSGDNLSSDDDGEMNNLQIAIGRINWGI
DWVKASVRHMVLQLLGKKATGDKEGGEGIEGNPEKETFALNHLDMCQDSKMADGMANCVD
GLQADGEMSLNVPIAQGETDFENDDDYSGSFTSDEENGQGDHLKVQYDGKLKTIILLGAV
GDESSVCSTVDYVPEPEPVEEEEEEEPEPEEPEACFTDGCIARWPCLTFDVSQGRGKKWW
NLRRTCFTIVEHDYFETFIVFMILLSSGALAFEDIYIERRRTIKIILEYADKVFTYVFII
EMLLKWVAYGFKTYFTNAWCWLDFLIVDVSLVTLGANWMGYSELGPIKSLRTLRALRPLR
ALSRFEGMRVVVNALVGAIPSIFNVLLVCLIFWLIFSIMGVNLFAGKFYRCINTTTEELF
PITEVNNRSDCLALQHATQEARWVNVKVNYDNVGLGYLSLLQVATFKGWMDIMYAAVDSR
EVEEQPSYEINLYMYIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGDDIFMTEEQKK
YHEAMKKLGSKKPVKPIPRPTNMIQGAVFDFITQQFFDIFIMVLICLNMVTMMVETDDQS
AEKENVLYKINLAFIVVFTGECLLKMFALRHYFFTIGWNIFDFVVVILSVAGIMLSDIIE
KYFVSPTLFRVIRLARIGRVLRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLIMFIFSI
FGMSNFAYVKKQAGIDDIFNFQTFGSSIICLFEITTSAGWDGLLLPILNSGPPDCDPDIE
NPGSDVRGNCGNPGMGIMFFCSYIIMSFLVVVNMYIAIILENFNTAQEESGDLLCEDDFV
MFEETWEKFDLEGTQFIEYAKLSEFCDTLQEPLRIAKPNRIKLISMDLPLVTGDKIHCLD
ILLAVTQEVLGEGVEMTAMKVSIEAKFNMNNPTTDSYEPITTTLRRKEEEAAAVIIQRAY
RKHLLKRSILHASFMRRSKRQIRRVENEEPPETEGLLVRKMNVLYGSDLDLAAEMELAGL
RAQPISVPLVSNRPSDLPKQTQTTRPEPGRPLLLVVPVEVTSEVVLHSAPVTSDPPLDLP
GQTQPSGSEPTGLEPTWPEPAGPNLLVVPVEVTPYLCSRESIDILRESIV
NT seq
5733 nt
NT seq
+upstream
nt +downstream
nt
atggcacccctgctccctcccacaggcgctgatgcgttccgccgcttcaccccggaatcc
ctggcagagatcgagaggctcatggaggaaaagagaatagccgcggaagtagagggtgat
gggccgtcggagcccagcaaagacctggaagccggcaagagtctgcccatgatctttgga
gacgccccaacggagatgcttaacacaccactggaggacatagaccccttctacaaagca
cagaagacctttatcgtgatcaccaaaggaaacacaatcttcaggttcaatgctgaatca
gcttgctacattctaagccccttcaatcatcttagaagaggagccattaaaattctcata
cattcgttcatcatgattaccattctgtcgaactgcttttttatgacgatgagcgaccca
ccgtcatggagtaaaactgttgagtatgtttttactggtatttatacctttgaggcctca
tgcaaagtgttgtcaagaggctttgttgttggcccttttacattccttcgagatccatgg
aattggctggatttcatggtgatcagcatggcgtacgtcacagagtttgttgatctcggc
aacgtgtcagcccttaggacgttccgtgtactccgagcccttaaaacaatcactgtgatt
cctggattaaaaaccatcgtgggcgccctggtccagtctgtaaagaaaatggtagacgtg
atgatcctcactgtgttcgccctggccgtgtttgcgctcatcggcctgcaactcttcatg
ggaaatttgcgcaacaagtgtgtccgatggcccatcctcaactcaacggtgttcgacgat
tacaactccacctcgtcgcttgacgccaccatgggtttcggcgaaacatcaaattccact
gttcctgtcgatttcaaggagtacatcagcaatatagagaaccactactatttggaaggt
agtctggatgctcttctctgcggaaacagctctgatgctgggaagtgcccagaaggattc
acgtgcataaaggctgggagaaaccccaactacggctacaccagctacgactcctttggc
tgggccttcttgtccctcttcagactcatgacgcaggactactgggagaacctgttccaa
ctgacacttcgagcagcggggaagacgtacatgatcttctttgtgctggtcatcttcctg
ggttccttctacctcatcaacctcatcctggccgtggttgccatggcctacgacgagcag
aacgaggccactctgaaagaggcgcaggataaggaggaggagtttcagaggcttctggag
caatacaggatccaagagcaagctgatgctgctgctggaagtcaggcgaccctgacaagt
cggaaagagcttagtcatcactctgggtcatacgggggctctgcggatgacgagcagagc
ctcggagatgacgttatcaaggactgtaatgggagaatcgtgccccgtctggccatcgtt
ccagtgtcctctgagtcggagtcggttccagaggacgagctcaaagaggacagcatgttc
catctggagcagccaggcctgaagaacagatcggcgagtgctgttagtgttctcaccacc
gtcatggaggagctggaagacgcccagaagccttgtccacccggctggtacaagtttgcc
gacatcttcctgaagtgggactgttgcgtgccctgggtatggttgaagaagtggttgctc
tttattgtgatggaccccttcgtggacctaggcatcaccatctgcatcgtgctcaacacc
ctcttcatggccatggagcactaccccatgagcccagagtttgaccacatgctctccgtg
gggaacctggttttcactgggatcttcacagcagagatggtcttcaagctttgcgccatg
gatccgtactactacttccaggtcggctggaacattttcgacagtatcattgtcacgttc
agtctggtggagttaggtctagccaatgtccaaggcctgtccgttctcaggtctttccgt
ttgctgcgtgtcttcaaactagccaagtcgtggcccacgctcaacatgctgatcaagatt
attggcaactctgtgggcgctctgggcaacctgaccttggtgctggccatcatcgtcttc
atcttcgccgtggtgggcatgcagctctttggcaagagctacaaggaatgcgtatgtaag
attgccaccgactgcgagttgccacgttggcacatgcacgacttcttccactcattcctc
atcgtgtttcgcatcctgtgcggggagtggatcgagaccatgtgggactgtatggaggtg
gccggagccgggatgtgcctggtggtcttcatgatggtcatggtcatcggaaacctggtg
gtgctgaacctcttcctggccttgctgctcagctcattcagtggagacaacctgtccagt
gatgacgacggtgagatgaacaacctccagatcgccatcggcaggatcaactggggcatc
gactgggtgaaagcctctgtccgccacatggtcctgcagctactgggcaaaaaggccacc
ggggacaaggaagggggtgaggggatcgaaggaaaccccgaaaaggagacctttgcacta
aaccacttagacatgtgccaggattccaagatggccgacgggatggccaactgtgtggac
gggcttcaggcagacggcgagatgagcctcaatgtgcccattgcccagggggagacggac
tttgagaacgatgatgactacagtgggtcttttacatcagatgaagaaaatggacaaggt
gatcacttgaaggtacagtatgatggcaaactgaagacgataattttgttgggtgcagtg
ggtgacgagtcctcggtgtgcagcacggtggactatgtacctgaaccagagcctgtggaa
gaggaggaagaggaggagccagagccagaggaaccagaagcttgcttcactgatggctgt
atcgcgcgatggccgtgtctgacatttgacgtctctcagggcagaggcaagaagtggtgg
aacctccgcaggacctgtttcaccatcgtggaacacgactactttgagaccttcatagtc
ttcatgatcctcctaagcagtggagctctggcttttgaggatatttacattgagaggaga
agaactatcaaaatcatcctggagtatgcagacaaagtcttcacctatgtctttatcatt
gagatgctcttaaaatgggtggcgtacggcttcaagacctacttcaccaacgcttggtgt
tggctggacttcctaattgtggatgtttccttagtcactttaggagctaactggatgggc
tactctgaacttggaccaatcaagtctcttagaacactcagggctctaaggccacttcga
gccctgtcaagatttgagggaatgagggtggtggtaaacgctcttgtcggcgccatcccc
tccatcttcaacgtgctgctggtgtgcctcatcttctggctcatcttcagcatcatgggg
gtcaacctgtttgccggaaagttctaccgctgcatcaacaccaccacggaggagctgttc
cccatcaccgaggtcaacaacaggagcgactgccttgccctgcagcacgccacccaggaa
gcccgctgggtcaacgtcaaagtcaactacgacaacgtgggcttgggctacctctctctg
ctgcaagtggccacatttaaaggctggatggacatcatgtatgctgccgtggactctcga
gaagtggaggagcagccctcatatgagatcaacctctacatgtacatctactttgtcatc
ttcatcatcttcggctccttcttcaccctcaatcttttcattggtgtcattattgacaat
ttcaaccagcaaaagaaaaagtttggtgacgacatctttatgacagaggagcagaagaaa
tatcatgaagccatgaagaaacttggctcgaagaagccagtgaagcctatcccaaggcct
acgaacatgattcaaggcgctgtgtttgacttcatcactcagcagttctttgacatcttc
atcatggtcctcatctgcctcaacatggtcaccatgatggtggagacggacgaccaaagc
gcggagaaggaaaatgtcctttacaagatcaacctggccttcatcgtcgttttcaccgga
gagtgtctgctcaagatgtttgcccttcgccattacttcttcaccatcggatggaatatt
tttgattttgtcgtggtcatcctgtccgtcgcgggtataatgctgtcggacatcatagag
aagtactttgtgtcacccaccttgttcagggtcatcaggctggctaggataggcagggtc
ctgcgtctcatcaaaggtgccaagggcattcggacgctgttatttgcgttgatgatgtca
ctccctgccctgttcaacatcggcctcctgctcttcctcatcatgttcatcttctctata
ttcggcatgtccaactttgcctacgtcaaaaaacaggcgggcatcgacgacatcttcaat
ttccagacgttcggcagcagtattatctgcctgtttgagatcaccacctctgcgggttgg
gatggtcttctgctgccaattctaaacagcggtcctccagactgcgacccagacattgag
aacccgggctcggacgttcggggcaactgcggcaacccaggcatgggtatcatgttcttt
tgcagttacatcatcatgtccttcctggtggtggtcaacatgtacatcgccatcatccta
gagaacttcaacacggcccaagaggagagtggggacctgctgtgcgaggatgactttgtg
atgttcgaagagacctgggagaagttcgaccttgagggcacgcagttcatcgaatatgcc
aagctgtcagagttttgcgacaccctgcaggaacccctgcgtatcgccaagcccaaccgg
atcaagctgatctcgatggacctgcccctggtcacgggcgataagattcactgcctggac
atcctgctggccgtcacccaggaggtgctgggcgaaggggtggagatgacggccatgaag
gtgagcatcgaggccaagttcaacatgaacaaccccacgacagactcctacgagcccatc
accaccacgctgcggcgcaaggaggaggaggcagcagccgtgatcatccagcgggcttac
cgcaagcaccttctcaagcgctccatcctgcatgcctccttcatgcgccgctccaagagg
cagataaggcgggtggagaatgaggagcccccggagacggagggacttctggtgcgaaag
atgaatgtgctctatgggagcgacctggaccttgccgcagagatggaattggctgggttg
cgagcgcaacccatatcggtccctctggtgtccaatcggccatcggacctccccaagcaa
acccagaccaccaggccggagcctggcagaccactcctcttggtggtccccgttgaggtc
accagtgaggtggtgttacactcagcccctgtgacgtctgatccgccattggacctcccc
gggcaaacacaaccatcggggtcggagcccacagggctggaacctacctggccggagcct
gctgggccaaacctcttggtggtccccgtagaggtcaccccctatttgtgtagccgtgag
tcaatagacatcctgcgagagtcgattgtataa
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