Oncorhynchus mykiss (rainbow trout): 100136034
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Entry
100136034 CDS
T07259
Symbol
tnf-alpha
Name
(RefSeq) putative tumour necrosis factor alpha
KO
K03156
tumor necrosis factor superfamily, member 2
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04010
MAPK signaling pathway
omy04060
Cytokine-cytokine receptor interaction
omy04150
mTOR signaling pathway
omy04210
Apoptosis
omy04217
Necroptosis
omy04350
TGF-beta signaling pathway
omy04620
Toll-like receptor signaling pathway
omy04621
NOD-like receptor signaling pathway
omy04622
RIG-I-like receptor signaling pathway
omy04625
C-type lectin receptor signaling pathway
omy04920
Adipocytokine signaling pathway
omy05132
Salmonella infection
omy05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
100136034 (tnf-alpha)
04350 TGF-beta signaling pathway
100136034 (tnf-alpha)
04150 mTOR signaling pathway
100136034 (tnf-alpha)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
100136034 (tnf-alpha)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
100136034 (tnf-alpha)
04217 Necroptosis
100136034 (tnf-alpha)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
100136034 (tnf-alpha)
04621 NOD-like receptor signaling pathway
100136034 (tnf-alpha)
04622 RIG-I-like receptor signaling pathway
100136034 (tnf-alpha)
04625 C-type lectin receptor signaling pathway
100136034 (tnf-alpha)
09152 Endocrine system
04920 Adipocytokine signaling pathway
100136034 (tnf-alpha)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
100136034 (tnf-alpha)
09171 Infectious disease: bacterial
05132 Salmonella infection
100136034 (tnf-alpha)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
omy04052
]
100136034 (tnf-alpha)
00536 Glycosaminoglycan binding proteins [BR:
omy00536
]
100136034 (tnf-alpha)
Cytokines and neuropeptides [BR:
omy04052
]
Cytokines
Tumor necrosis fators
100136034 (tnf-alpha)
Glycosaminoglycan binding proteins [BR:
omy00536
]
Heparan sulfate / Heparin
Cytokines
100136034 (tnf-alpha)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
Mobilization_B
Motif
Other DBs
NCBI-GeneID:
100136034
NCBI-ProteinID:
NP_001117829
Ensembl:
ENSOMYG00000025945
UniProt:
Q9I976
LinkDB
All DBs
Position
2:35023007..>35025008
Genome browser
AA seq
246 aa
AA seq
DB search
MEGYAMTPEDMERGPVYNTTVTAVAEGKASRGWLWRLCGVLLIAGLCAAAALLFAWCQHG
RPSTMQDEIEPQLEILIGAKDTHHTLKQIAGNAKAAIHLEGEYNPNLSADTVQWRKDDGQ
AFSQGGFELQGNQILIPHTGLFFVYSQASFRVKCNSPGEHTTPLSHIIWRYSDSIGVNAN
LLSGVRSVCQQNYGDAESEIGEGWYNAVYLGAVFQLNEGDKLWTETNRLTDVEPEQGKNF
FGVFAL
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atggaggggtatgcgatgacacctgaagacatggagaggggccctgtgtacaacacaacg
gtgacagctgtcgctgagggaaaggcctccagaggttggctatggaggctgtgtggggtc
ctcttaatagcaggtctatgtgcggcagcagccctactctttgcatggtgtcagcatgga
agaccgtcaacgatgcaggatgaaattgagcctcaactggagatactcattggtgcaaaa
gatacccaccatacattgaagcagattgccggcaatgcaaaagcagccatccatttagag
ggtgaatacaatcctaatctttccgctgacaccgtgcagtggagaaaggatgacggccag
gctttttcccagggcgggttcgagctacaggggaaccaaatcctcatcccacacactggg
ctcttcttcgtttacagccaggcttcgtttagggtcaagtgcaatagcccgggcgagcat
accactcctctgagtcacattatttggcgctattcggactccatcggggttaatgctaat
cttcttagcggggtaaggtcagtttgtcaacaaaactacggtgatgctgagtccgaaatt
ggcgaaggctggtacaatgcagtttaccttggtgcagtgttccagctgaacgaaggggac
aaactgtggactgagaccaatcgactgaccgacgtggagccagagcagggcaagaacttc
tttggtgtgtttgcactatga
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integrated database retrieval system
