KEGG   Oncorhynchus mykiss (rainbow trout): 100136064
Entry
100136064         CDS       T07259                                 
Symbol
tnf
Name
(RefSeq) tumor necrosis factor
  KO
K03156  tumor necrosis factor superfamily, member 2
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy04010  MAPK signaling pathway
omy04060  Cytokine-cytokine receptor interaction
omy04150  mTOR signaling pathway
omy04210  Apoptosis
omy04217  Necroptosis
omy04350  TGF-beta signaling pathway
omy04620  Toll-like receptor signaling pathway
omy04621  NOD-like receptor signaling pathway
omy04622  RIG-I-like receptor signaling pathway
omy04625  C-type lectin receptor signaling pathway
omy04920  Adipocytokine signaling pathway
omy05132  Salmonella infection
omy05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:omy00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    100136064 (tnf)
   04350 TGF-beta signaling pathway
    100136064 (tnf)
   04150 mTOR signaling pathway
    100136064 (tnf)
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    100136064 (tnf)
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    100136064 (tnf)
   04217 Necroptosis
    100136064 (tnf)
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    100136064 (tnf)
   04621 NOD-like receptor signaling pathway
    100136064 (tnf)
   04622 RIG-I-like receptor signaling pathway
    100136064 (tnf)
   04625 C-type lectin receptor signaling pathway
    100136064 (tnf)
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    100136064 (tnf)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    100136064 (tnf)
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    100136064 (tnf)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:omy04052]
    100136064 (tnf)
   00536 Glycosaminoglycan binding proteins [BR:omy00536]
    100136064 (tnf)
Cytokines and neuropeptides [BR:omy04052]
 Cytokines
  Tumor necrosis fators
   100136064 (tnf)
Glycosaminoglycan binding proteins [BR:omy00536]
 Heparan sulfate / Heparin
  Cytokines
   100136064 (tnf)
SSDB
Motif
Pfam: TNF Mobilization_B
Other DBs
NCBI-GeneID: 100136064
NCBI-ProteinID: NP_001117846
Ensembl: ENSOMYG00000018888
UniProt: Q9DEP9
LinkDB
Position
3:26470473..26472863
AA seq 255 aa
MEGYAMTPEDMERGLENSLVDSGPVYKTTVTAVAERKASRGWLWRLCGVLLIAALCAAAA
LLFAWCQHGRLATMQDGMEPQLEIFIGAKDTHNTLKQIAGNAKAAIHLEGEYNPNLTADT
VQWRKDDGQAFSQGGFKLQGNQILIPHTGLFFVYSQASFRVKCNGPGERTTPLSHVIWRY
SDSIGDKGNLLSGVRSVCQQNYGNDESNIGEGWYNAVYLSAVFQLNEGDKLWTETNRLTD
VEPEQGKNFFGVFAL
NT seq 768 nt   +upstreamnt  +downstreamnt
atggaggggtatgcgatgacacctgaagacatggagaggggccttgaaaatagccttgtg
gacagtggccctgtgtacaagacaacagtgacagctgtcgctgagagaaaggcctcaaga
ggttggctatggaggctgtgtggcgttctcttaatagcagctttatgtgcggcagcagcc
ctgctctttgcctggtgtcagcatggaagactggcaacgatgcaggacggaatggagcct
cagctggagatattcattggtgcaaaagatacccacaatacattgaagcagattgccggc
aatgcgaaagcagccatccatttagagggtgaatacaatcctaatcttaccgctgacaca
gtgcagtggagaaaggatgacggccaggccttttcccagggcgggttcaagctacaaggg
aaccaaatcctcatcccacacactgggctcttcttcgtttacagccaggcttcttttagg
gtcaagtgcaacggcccgggcgagcgtaccactcctctgagtcacgttatttggcgctat
tcggactccatcggggataagggtaatctacttagcggggtaaggtcagtttgtcaacaa
aactacggtaatgatgagtccaatattggcgaaggctggtataatgcagtttaccttagt
gcagtgtttcagctgaatgaaggggacaaactgtggactgagaccaatcgactgaccgac
gtggagccagagcagggcaagaacttctttggtgtgtttgcactatga

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