KEGG   Oncorhynchus mykiss (rainbow trout): 100136087
Entry
100136087         CDS       T07259                                 
Symbol
traf2
Name
(RefSeq) tumor necrosis factor receptor associated factor 2
  KO
K03173  TNF receptor-associated factor 2 [EC:2.3.2.27]
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy04010  MAPK signaling pathway
omy04137  Mitophagy - animal
omy04141  Protein processing in endoplasmic reticulum
omy04210  Apoptosis
omy04217  Necroptosis
omy04621  NOD-like receptor signaling pathway
omy04622  RIG-I-like receptor signaling pathway
omy04920  Adipocytokine signaling pathway
omy05132  Salmonella infection
omy05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:omy00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    100136087 (traf2)
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    100136087 (traf2)
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    100136087 (traf2)
  09143 Cell growth and death
   04210 Apoptosis
    100136087 (traf2)
   04217 Necroptosis
    100136087 (traf2)
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    100136087 (traf2)
   04622 RIG-I-like receptor signaling pathway
    100136087 (traf2)
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    100136087 (traf2)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    100136087 (traf2)
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    100136087 (traf2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:omy03019]
    100136087 (traf2)
   04121 Ubiquitin system [BR:omy04121]
    100136087 (traf2)
Enzymes [BR:omy01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     100136087 (traf2)
Messenger RNA biogenesis [BR:omy03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     100136087 (traf2)
Ubiquitin system [BR:omy04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRAF proteins
    100136087 (traf2)
SSDB
Motif
Pfam: TRAF-mep_MATH MATH_2 TRAF_BIRC3_bd zf-TRAF TRAF2_zf TRAF3_RING zf-C3HC4 zf-C3HC4_4 zf-RING_5 zf-RING_4 zf-C3HC4_2 zf-RING_6 zf-C3HC4_5
Other DBs
NCBI-GeneID: 100136087
NCBI-ProteinID: NP_001117865
Ensembl: ENSOMYG00000033771
UniProt: Q7T2X2
LinkDB
Position
Y:complement(19882762..19905873)
AA seq 526 aa
MARISLPSLDSSLPRIPQSVLAVSVEAKYQCQQCHQVLRKPVQAQCGHRFCVHCFKLLTS
SGPKPCEACRQEEIYEEPQSILNSNEAFPDNAAGREIASLPAKCISEGCSWTGCIKEYEA
QHEGKCDYERVPCETCQVLILRSEKERHNERECEARTLNCKYCKVSFNFKEIKAHDEICQ
KFPMQCKDCGKKKIPREKFLDHSRSCAKSKTACPFSEVGCKVVIDNGKHSDHEQTSVMEH
LRLILATMSLVRLQRPEAPGLGEWQEDSGLGLYRAPEDGATAIAATDGGGAAASGQTFGL
DHKVRALENIVCVLNREVERSSLTLEAFSRQHRLDQDKIENLGDKVRQLERTLTMRDLQL
AETDQTLRELQFCTFDGVFVWKIADFSRRRQDAVAGRTPAMFSPAFYSSKYGYKMCLRLY
LNGDGTGRGTHLSLFFVVMRGKCDALLKWPFSQKVTLMLLDQNNREHIIDAFRPDVISTS
FLRPNREMNIASGCPLFCPLAKLAGKSSYLRDDTIFIKAIVDLTGL
NT seq 1581 nt   +upstreamnt  +downstreamnt
atggcccgcatatctctaccctctttggactcctcccttccaaggataccccaaagtgtc
ctggctgtttccgtggaagcgaagtaccaatgccagcagtgtcaccaggtcctgaggaag
ccagtccaggctcagtgtggacatcgtttctgtgtccattgtttcaaactgctcaccagc
tccggcccaaagccctgtgaagcctgtcgacaggaggagatatatgaggagccacagtcc
attctcaatagtaatgaggcttttccagacaatgcagctggtagagaaatcgccagcctg
cctgccaaatgtatcagtgagggatgctcttggactggttgcataaaagaatatgaggca
caacacgagggcaagtgtgattatgagcgagtaccatgtgaaacctgccaggtcctcatc
ctgcgcagtgaaaaagagaggcataatgagagagaatgtgaagcaaggacattgaactgc
aagtactgcaaagtctccttcaacttcaaggaaatcaaggctcatgatgaaatctgccag
aagtttcccatgcagtgcaaggactgtggaaagaaaaagatcccacgggaaaagtttcta
gatcacagcagatcctgtgccaagtctaagactgcatgtccgttcagtgaggtcggctgc
aaggttgtgattgataatgggaagcacagtgaccacgagcagactagtgtcatggagcac
ttgcgtctgatcctggcgacgatgtctctggtgcggcttcagcgtccagaggccccaggg
ctgggggagtggcaggaggactctgggctgggcctgtaccgcgctcccgaggatggagcc
acagctattgcagccacagatgggggaggagctgctgcctctggacagacctttggtctt
gaccacaaggtgagagcactggagaatatagtgtgtgtactgaacagggaagtagagagg
agttctctcactttagaggccttctcacggcaacatcgtctagaccaagacaagattgag
aacctcggcgacaaggtacgtcaactagagcgtactctcaccatgcgggacctacaactg
gctgagacagaccagactctgagagaactccagttttgcacctttgatggtgtctttgtc
tggaagatcgccgacttctcacggcgccgccaggatgctgtggccgggcgaacacccgct
atgttctcaccagcattctactcaagtaaatatggctataagatgtgtctgagactgtat
ctgaatggggacggaacgggtcgagggactcacctttctcttttcttcgtggtgatgagg
ggcaagtgtgacgctctgctcaaatggcccttcagtcagaaggtgacactgatgctgctg
gatcagaataacagggagcatatcattgatgccttccggcctgatgtaatctccacctct
ttcctgcggccaaatcgtgagatgaacatagccagtggctgcccactcttctgcccattg
gctaaactggcaggcaagagctcctaccttagggatgacaccattttcatcaaggccatt
gtagacctcacaggcctgtag

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