Oncorhynchus mykiss (rainbow trout): 100136790
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Entry
100136790 CDS
T07259
Name
(RefSeq) sodium channel protein type 4 subunit alpha A
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
omy04040
]
100136790
Ion channels [BR:
omy04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
100136790
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
IQ
Zip
GPHH
Motif
Other DBs
NCBI-GeneID:
100136790
NCBI-ProteinID:
NP_001118204
Ensembl:
ENSOMYG00000040302
UniProt:
B0L0M1
LinkDB
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Position
13:<32462211..>32505925
Genome browser
AA seq
1903 aa
AA seq
DB search
MARILPPTGTEVFRHFTLESLVEIDRRMAEEAKEQERQKTLNIEVAEQDLPKPAVDLETG
KILPFIYGDPPCELFNTPLEELDPFYKSHKTFIVITKRNTIFRFNAEPACYILTPFSILR
RGSIKILMHSLFSMFIMLTVVFNCAFMTISDPPASSKTVEYVFTGIYTFEATIKVLSSGF
CVGDFTYFRDPWNWLDFMVISMAYLTEFVDLGNVSALRTFRVLRALKTITVIPGLKTIVG
ALIQSVKKLADVMILTVFCLAVFALVGLQLFMGNLKQKCVYWPPVEWRINSTNMDNITMA
FNDTSGFNDVMDYNGTNSSNSTWDFKAYIDDKVNHYFLPGMLDPLLCGNASDAGNCPEGY
TCMKAGGNPNYGYTSYDSFGWAYLALFRLMTQDFWENLFQLTLRSAGKTYMIFFVVVIFL
GSFYLINLILAVVAMAYAEQNEATMAEAKEKEEEYAMIMVQLKERREAEVKERHDRHHEH
HEHAEIAGSQTSLSGRTSKKEKGEKADEEVADDEACTSSSLYSEAIKDSNGGLMISANAN
KVLTDQESAVVLKRASGPKGSKDQLEVVGLQKKTPSSSSVYSQDDMDDLEEELRPCPPCW
YKCSDIFLKWNCCVPWVTFKKWMYFIVMDPFVDLGITICIVLNTMFMAMEHYPMTPEFEE
VLSVGNLVFTGIFTAEMVLKLIAMDPYYYFQVGWNIFDSIIVTMSLVELGLANVEGLSVL
RSFRLMRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE
CVCKISLDCELPRWHMHDFFHAFLIIFRVLCGEWIETMWECMEVAGQGMCLIVFMMVMVI
GNLVVLNLFLALLLSSFSGDNLAAPEEDGEMNNLQIATGRITRGIDWAKAYVIQQFCIII
GKQPKEDGDGADGNGGSNGDVDGLPKGSLALKNIISSDNPKADLELTMLDVWIDDVNPSG
FLTNDNLTLDVPIAKMESDDDEDDISEEEEGEGANGDAKEDTGLKKPIAPDNASSICSTV
DNPPEVEEEEEEEADTTNPENCWTEKCIGRCPCLDFDITAGKGKTWWNFRKTCFLIVEHN
YFETFIIFMILMSSGALAFEDIYIEQRRTIKIILEYADQVFTYVFIIEMLLKWVAYGFQA
YFTNAWCWLDFLIVDVSLISLTANILGYAELGPIKSLRTLRALRPLRALSRFEGMRVVVN
ALVGAIPSIFNVLLVCLIFWLIFSIMGVNMFAGKYYYCFNTTSEERFSADVVNNKTECYQ
LMEGNDDVRWMNAKVNYDNVAMGYLSLLQIATFKGWMDIMYGAVDSRFVEDQPIYEDNVY
MYIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGKDIFMTEEQKKYYNAMKKLGSKK
PQKPIPRPQNKFAGLIFDLITQQFFDIFIMVLICLNMVTMMVETDGQSKEKEDILFLINL
VFIIVFTTECILKLIGLRQYFFSVGWNIFDFVVVILSIVGLLLADLIEKYFVSPTLFRVI
RLARIGRVLRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSNFAYVKKE
AGIDDMFNFETFGNSIICLFMITTSAGWDGLLSPILNSRAPDCDPDVENPGTDVRGNCGS
PGLGICFFCSYIIMCFLVVVNMYIAIILENFNVATEESGDPLCGEDFEMFYETWEKFDPD
ASQFIAYDILSEFCDTLKDPLRIPKPNAIKLITMDLPIVPGDKIHCLDILLALTTEVLGE
SAEMDAMKESMEEKFMANNPSKVSYEPITTTLRRKQEEVAAVVIQRAYRKHLLRRSLKLA
SYKYREKKALTKEDEVPPETEGMIAIRMNKLYGSQQSLGVDETVVDMDSHEKRESKELTE
SQPPVETTEEPLPVELQNEIILHSAPFVIPASIRISQLKESDV
NT seq
5712 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcattctccctcccactggcaccgaagtgttccgccacttcacccttgagtcg
ctggtggagattgataggcggatggccgaggaagcaaaggagcaggagagacaaaagacc
ctgaacattgaggtggcagagcaggacctgccaaagccagccgtcgacctggagaccggc
aagatcctgccgttcatctacggagacccaccatgtgagctgttcaacacacccctggag
gaactggatcctttctacaaatcacacaaaacctttattgtcatcaccaaaaggaataca
atcttcagattcaatgctgagcctgcctgctacattctgactcccttcagtattctcagg
agaggatccatcaaaattctcatgcattcattgtttagcatgttcatcatgttgacagtc
gtgttcaactgtgcgtttatgacgatcagtgaccctccggcatcgagtaaaactgttgaa
tatgttttcactggtatctatacctttgaggcaacaattaaagtgttgtccagtggcttc
tgtgttggagatttcacatactttcgagatccatggaactggctggattttatggtgatc
agcatggcgtacctcacagagttcgttgacctgggcaatgtgtctgccctcaggacgttc
cgtgtgctccgagcccttaaaacaatcactgtaattcccggtctgaaaaccattgtgggc
gctttgatccagtcagtgaagaagctggccgatgtgatgatcctaacagtgttctgcctg
gctgtgttcgctctggtcggccttcaactgttcatgggaaacctgaagcagaagtgtgtt
tactggccccctgtggaatggcgtataaactctaccaacatggacaacatcactatggcc
ttcaacgacaccagtggttttaatgatgtcatggactacaatggcacaaacagcagcaac
agtacgtgggacttcaaggcatacatcgacgataaagtgaaccattacttccttcctgga
atgttagaccctcttctctgtggaaacgcttctgatgctggaaattgccctgaaggatac
acgtgtatgaaggccggagggaatcccaactatggatacacaagctacgacagttttgga
tgggcctaccttgccctatttcggctcatgacacaggacttctgggaaaatctattccag
ctgactcttcgctcagcagggaaaacctatatgattttctttgtggtggtgatcttcctg
ggctcgttctacctgatcaacctgatcctggctgtggtggccatggcgtatgccgagcag
aacgaggccaccatggccgaggccaaggagaaggaggaggagtatgccatgatcatggtg
cagctgaaggaaaggagagaagcagaggtcaaagagagacatgacaggcatcatgaacac
catgaacacgctgaaattgctggcagtcagacgtcactgtccggtagaacatctaagaaa
gagaaaggtgaaaaggcagatgaagaggttgctgatgatgaggcgtgtacgtcctccagc
ctttatagcgaggctataaaggactccaatggaggcctcatgatcagtgccaacgccaac
aaggtcctgacagaccaggagtctgctgttgtgttgaagagggccagtggacccaagggg
agtaaggaccagctggaagtagtaggcctgcagaagaagacacccagttcatccagtgtc
tacagccaagatgacatggacgatttggaggaggaactgagaccttgtccgccttgctgg
tacaagtgttcagacatcttcctgaaatggaactgctgtgtgccctgggtgactttcaag
aagtggatgtacttcatagtgatggacccattcgtggacttgggtatcaccatctgcatt
gtactcaacaccatgttcatggccatggagcactaccccatgacgccagagtttgaagaa
gtcctgagtgtggggaacttggtcttcacaggaatcttcacagcagagatggtgctgaag
ctcatcgccatggatccgtactactacttccaggtcgggtggaacatcttcgacagcatc
attgtgacaatgagcctggtggagctggggctggccaacgtcgaaggtctatccgtgcta
cgttccttccgtctgatgcgtgttttcaagctggccaaatcctggcccacactcaacatg
ctaatcaagatcatcggtaattcagtgggcgcactgggtaacctcaccctggttctggcc
atcatcgtcttcatcttcgccgtggtgggcatgcagctcttcggcaagagctacaaagag
tgtgtctgcaagatctccttggactgcgagctgccccgctggcacatgcatgacttcttt
cacgcttttctcatcatcttccgggtgctgtgcggagagtggatcgagaccatgtgggaa
tgcatggaggtggccggacagggcatgtgtctcattgtcttcatgatggtcatggtcatc
ggtaacctagtggtgttgaacctcttcttggccttgctgctgagctcgttcagcggtgac
aacctggcggctccagaggaggacggggagatgaacaacctgcagatcgccaccggcagg
atcaccagaggcatcgactgggccaaggcctacgtcatccagcagttctgcattatcata
gggaagcagcctaaggaggatggagacggggctgacggtaatgggggtagtaatggggat
gtggacggcctcccaaagggcagcttggctttgaaaaatataatctccagtgacaaccca
aaggctgatttggagctcacaatgcttgacgtttggatagacgatgtcaacccaagtgga
tttcttacaaatgacaatttgaccctggatgtacctattgccaaaatggagtcggatgat
gatgaggatgacatctctgaagaggaagaaggagaaggtgcaaatggagatgctaaagag
gatactgggttaaagaaacctattgcaccggacaatgcctcttcaatatgcagcacagtg
gacaatccccctgaagtggaagaagaggaggaagaagaggcagacaccaccaaccctgag
aactgctggaccgagaaatgcattggaagatgcccgtgccttgattttgacatcaccgcg
ggcaaaggaaagacttggtggaacttcaggaagacatgcttcctcattgtggagcacaac
tactttgagaccttcatcatcttcatgatcctgatgagcagcggcgctttggcttttgaa
gacatatacattgagcagcgcaggaccataaaaatcatcctggaatatgctgatcaagta
ttcacctacgtgttcattattgagatgctcctgaagtgggtggcttatggattccaggcc
tacttcacaaacgcatggtgctggctggacttcctcattgtggatgtgtctttgattagc
ttaacggctaacatcctgggctatgctgaacttggaccaatcaaatctcttcgaacttta
agggccttgcggcccctccgcgccctgtccagatttgagggaatgagggtggtggtgaat
gctctggtaggggctattccttccatcttcaacgtgcttctagtgtgcctcatcttctgg
ctcatcttcagcatcatgggtgtaaacatgtttgctgggaagtactactactgcttcaac
accacgtctgaggagaggttctctgctgacgttgtgaataacaagaccgaatgctatcaa
ctaatggagggtaatgatgacgtgcgctggatgaatgcaaaggtcaactatgacaacgtg
gccatgggctacctctccctcctgcaaatagcaacgtttaaaggatggatggatataatg
tatggcgctgtggattcacgttttgtggaagaccagcccatatatgaggataatgtttac
atgtacatctactttgtcatattcatcatctttgggtccttcttcaccctgaatctcttc
attggtgtcattatcgacaacttcaaccaacaaaaaaagaagtttggagggaaagacatt
ttcatgacagaggaacagaagaaatactacaatgccatgaaaaagcttggttccaagaag
ccacagaaacccattcctagaccccagaacaaattcgcaggccttattttcgacctgatc
acccaacaattcttcgacatcttcatcatggtgctgatctgcctcaacatggtaacgatg
atggtggagacggacggccagagcaaggagaaggaggatatactcttcctcatcaacctg
gtgtttatcatcgtcttcaccacagagtgtatcctcaagttgatcggactgcgacaatat
tttttttccgtcggatggaatatttttgattttgtcgtcgtcattctctccatcgttggt
ttactgctggcggacctcatagagaagtattttgtctcacctacccttttccgtgtcata
agactggccaggattggtcgagttctgagactcatccgaggagctaaaggcatccggaca
ctgttgtttgccctgatgatgtcacttcctgctctcttcaacattgggctcctgctcttc
cttatcatgtttatcttctccattttcggaatgtccaactttgcgtatgtcaagaaggag
gccggaatagacgatatgttcaattttgaaacttttggcaacagtataatttgtctgttc
atgatcacaacctcagctggttgggatggtctcctctcacccattctaaatagtagagct
ccggattgtgacccggacgtggaaaatcccggcacagatgtaagaggcaactgcggcagc
cctggtttgggaatttgttttttctgcagctacatcatcatgtgtttccttgttgtggtc
aacatgtacattgccattatcctcgagaacttcaatgtggccacagaggagagtggcgac
cctctgtgtggggaagacttcgagatgttctacgagacctgggagaagttcgaccctgac
gcgtcacaattcatcgcctacgacattttgtcggagttctgtgacacgcttaaagacccg
cttaggatccccaaacccaacgcaatcaagctgatcaccatggaccttcccattgtccct
ggggataagatccactgtctggacatcctgctggcgctgaccacagaggtgctgggagag
tcagcggagatggatgccatgaaagaaagcatggaggagaagttcatggccaacaacccc
tctaaagtgtcatacgagccaatcaccaccaccctgaggcgaaagcaggaggaggtagca
gctgttgttattcagagagcctatcgtaagcatctgctgagacgttcattgaaactcgct
tcctacaagtaccgcgagaagaaagcgttaaccaaggaggacgaagtgccgccagagacg
gagggaatgattgccatcaggatgaacaaactgtatggaagccaacaatcactcggagtg
gatgaaacagttgtagatatggattctcatgaaaaacgggagagcaaagaactgacagag
tcacaacctcctgtggagactactgaagagccgctgcctgtggagcttcagaacgagatc
atcttgcactctgccccctttgtcatcccggcctcaatccgtatctcacagctgaaagag
tccgatgtttga
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