Oncorhynchus mykiss (rainbow trout): 100301858
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Entry
100301858 CDS
T07259
Symbol
rbx1
Name
(RefSeq) RING-box protein 1
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03420
Nucleotide excision repair
omy04110
Cell cycle
omy04114
Oocyte meiosis
omy04120
Ubiquitin mediated proteolysis
omy04141
Protein processing in endoplasmic reticulum
omy04310
Wnt signaling pathway
omy04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
100301858 (rbx1)
04120 Ubiquitin mediated proteolysis
100301858 (rbx1)
09124 Replication and repair
03420 Nucleotide excision repair
100301858 (rbx1)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
100301858 (rbx1)
04350 TGF-beta signaling pathway
100301858 (rbx1)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
100301858 (rbx1)
04114 Oocyte meiosis
100301858 (rbx1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omy04121
]
100301858 (rbx1)
03400 DNA repair and recombination proteins [BR:
omy03400
]
100301858 (rbx1)
Enzymes [BR:
omy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
100301858 (rbx1)
Ubiquitin system [BR:
omy04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
100301858 (rbx1)
Multi subunit type E3
SCF complex
Ring finger protein
100301858 (rbx1)
Cul2 complex
100301858 (rbx1)
Cul3 complex
100301858 (rbx1)
Cul4 complex
100301858 (rbx1)
Cul7 complex
100301858 (rbx1)
Cul8 complex
100301858 (rbx1)
Cul9 complex
100301858 (rbx1)
DNA repair and recombination proteins [BR:
omy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
100301858 (rbx1)
TCR (transcription coupled repair) factors
Cul4-CSA complex
100301858 (rbx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
100301858
NCBI-ProteinID:
NP_001154159
Ensembl:
ENSOMYG00000036965
UniProt:
C1BGD1
LinkDB
All DBs
Position
12:complement(75534277..75537366)
Genome browser
AA seq
108 aa
AA seq
DB search
MAAAMDVDTPSATNSGASKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHRISRWLKTRQVCPLDNREWEFQKYGH
NT seq
327 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagcgatggatgttgatactccaagcgccacgaatagtggagcaagcaagaaa
cgttttgaagtgaagaagtggaatgcagtggcactttgggcctgggacattgtggtggac
aactgtgccatctgtaggaatcacattatggatctctgcatagagtgccaggctaaccag
gcctctgccacatcagaggagtgcaccgtagcctggggagtctgcaatcatgcattccat
ttccaccgtatctcccgttggttgaagaccaggcaggtgtgccccctagacaacagggag
tgggagtttcagaaatatggacactag
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