Oncorhynchus mykiss (rainbow trout): 100500795
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Entry
100500795 CDS
T07259
Symbol
oncmyk-dbb
Name
(RefSeq) MHC class II beta chain precursor
KO
K06752
MHC class II antigen
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04145
Phagosome
omy04514
Cell adhesion molecule (CAM) interaction
omy04672
Intestinal immune network for IgA production
omy05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
100500795 (oncmyk-dbb)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
100500795 (oncmyk-dbb)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
100500795 (oncmyk-dbb)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
100500795 (oncmyk-dbb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
omy04147
]
100500795 (oncmyk-dbb)
Exosome [BR:
omy04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100500795 (oncmyk-dbb)
Exosomal proteins of epithelial cells
100500795 (oncmyk-dbb)
Exosomal proteins of breast milk
100500795 (oncmyk-dbb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C1-set
MHC_II_beta
C2-set_2
Ig_3
C2-set_3
Motif
Other DBs
NCBI-GeneID:
100500795
NCBI-ProteinID:
NP_001182463
UniProt:
Q9TNW2
LinkDB
All DBs
Position
17:complement(65523708..>65526802)
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AA seq
246 aa
AA seq
DB search
MSKSIRFYICLAVALSTLYETDGYASDVVTRCLYSSIDMHGAEFIQSYTFNKVEHLRFNS
TVGEFVGYTELGLKNAKRLNRGQEVVQMRGELERLCKPNADIHYRAILDKTVEPHVRLSS
VTPPSGRHPAMLMCSAYDFYPKPIRVTWLRDGREVKSDVTSTEELANGDWYYQIHSHLEY
TPKSGEKISCMVEHISLTEPMMYHWDPSLPEAERNKIAIGASGLVLGTILALAGLIYYKK
KSSGVL
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagtcaattcgcttctacatttgcctagccgtggcattatccactctgtatgaa
acagatggatatgcctccgatgtggtgactcgatgtttatacagctctattgatatgcat
ggtgcagagttcatacagtcttatacctttaataaggttgaacatctcagattcaacagc
actgtgggtgagtttgttggatacactgagctgggtctgaagaatgcaaagagattgaac
cgtggtcaagaggtggttcaaatgcgaggagagctggagcgtctatgtaagcctaacgct
gatatccactacagagccatactggacaagacagttgagccccatgtcagactgagctca
gtgactccccccagtggcagacaccctgccatgctgatgtgcagcgcctatgacttctac
cccaaaccaatcagagtgacctggctgagggacggacgtgaggtgaaatctgatgtgacc
tccactgaggagctggctaacggggactggtactaccagatccactcccacctggagtac
acacccaagtctggagagaagatctcctgcatggtggagcacatcagcctcactgagccc
atgatgtatcactgggacccgtccctgcctgaggctgagaggaataagatagcgatcggg
gcatctggtctggtgctgggaaccatcttagcattagcaggactgatctactacaagaag
aagtcttctggggtgctctag
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integrated database retrieval system
