Oncorhynchus mykiss (rainbow trout): 101268950
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Entry
101268950 CDS
T07259
Symbol
cd40
Name
(RefSeq) tumor necrosis factor receptor superfamily member 5 precursor
KO
K03160
tumor necrosis factor receptor superfamily member 5
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04060
Cytokine-cytokine receptor interaction
omy04514
Cell adhesion molecules
omy04620
Toll-like receptor signaling pathway
omy04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
101268950 (cd40)
04514 Cell adhesion molecules
101268950 (cd40)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
101268950 (cd40)
04672 Intestinal immune network for IgA production
101268950 (cd40)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
omy04050
]
101268950 (cd40)
04090 CD molecules [BR:
omy04090
]
101268950 (cd40)
Cytokine receptors [BR:
omy04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
101268950 (cd40)
CD molecules [BR:
omy04090
]
Proteins
101268950 (cd40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
TNFR_16_TM
Motif
Other DBs
NCBI-GeneID:
101268950
NCBI-ProteinID:
NP_001268311
Ensembl:
ENSOMYG00000010299
UniProt:
I1SKZ2
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All DBs
Position
16:43192633..43208975
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AA seq
331 aa
AA seq
DB search
MRGVAKILGCFITTRIEMIVLLLCILSVLTVVYSCDPETQYMKNGVCCSMCGPGTKMLSS
HSGCLDPHCMPCQEGEYQHAFTDKNLCKLQPYCDPNKNFEHSTNRNTTSISPCKCKPGYH
CSSEECLTCVPHTKCRPGEEVKSKGNPIHDTVCKACPLNMFSSDSSAESKCKLWTVCTSE
FKTEAEGTATSNAVCVPVPNSYGTIITIVMAFLAAVVLGIVLFKFRGQLGEACKKANESC
MDLNLKRGTKRATADGRAEEGNAGPEEGREQLQPIIPFGEPSSTPYPSWPGPQIPEEVEA
KDMSENGQLVVQEEGKSDHVSVSDKQSVFYE
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgagaggagttgcaaaaatacttggttgttttattacgacaaggatcgaaatgatcgtt
ctgcttttatgtattctgtcggttttgaccgtggtttactcatgtgatccagaaacacag
tacatgaagaatggggtgtgttgcagtatgtgtgggccaggcaccaagatgttatccagc
catagcggttgtttagatccacattgtatgccatgccaagagggtgaataccagcatgca
ttcacagacaagaacctctgtaaactgcaaccatactgcgacccaaataaaaactttgag
cacagtaccaataggaacacaacaagcatcagcccatgcaaatgtaagcctggataccac
tgttccagtgaagagtgcctgacatgtgttccacatactaaatgcagacctggagaagag
gtcaaatccaaaggtaaccccatacatgacacggtgtgtaaggcctgtcctttaaacatg
ttctccagtgacagctctgccgagagcaagtgcaagctgtggacagtttgtacgtctgaa
ttcaaaactgaagccgaagggacagccacctcaaacgcggtctgtgtgccagtacccaat
tcctatgggacaataatcacaattgtaatggcctttctagctgcagtggttttgggtatt
gtcctgttcaaattcagaggtcaactcggagaggcctgcaagaaagcaaatgaatcctgt
atggacttgaatcttaagaggggaactaagagggctacagcagacggaagagcagaagag
ggaaacgcaggacctgaagaggggagggaacaacttcaacctataatcccatttggagag
ccatcatcaacaccatacccatcatggccaggtcctcaaataccagaggaggttgaagct
aaagacatgtctgaaaatggacaattggtggtgcaggaggagggtaaatctgaccatgtt
tctgtttctgataaacaaagtgtattttatgaatag
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