Oncorhynchus mykiss (rainbow trout): 101268968
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Entry
101268968 CDS
T07259
Symbol
cxcl12b
Name
(RefSeq) chemokine CXCL12b precursor
KO
K10031
C-X-C motif chemokine 12
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04060
Cytokine-cytokine receptor interaction
omy04672
Intestinal immune network for IgA production
omy04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
101268968 (cxcl12b)
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
101268968 (cxcl12b)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
101268968 (cxcl12b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
omy04052
]
101268968 (cxcl12b)
00536 Glycosaminoglycan binding proteins [BR:
omy00536
]
101268968 (cxcl12b)
Cytokines and neuropeptides [BR:
omy04052
]
Cytokines
Chemokines
101268968 (cxcl12b)
Glycosaminoglycan binding proteins [BR:
omy00536
]
Heparan sulfate / Heparin
Chemokines
101268968 (cxcl12b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IL8
Motif
Other DBs
NCBI-GeneID:
101268968
NCBI-ProteinID:
NP_001268338
UniProt:
H1ZZ94
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All DBs
Position
17:complement(19422266..19432208)
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AA seq
99 aa
AA seq
DB search
MDVKVLAVLAILAVAMDVPPSTAKPISLVERCWCRSTLNTVPQRSIRELKFLHTPNCPFQ
VIAKLKNNREVCINPETKWLQTYLKNAINKVKKSRRRAQ
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atggatgtcaaagtactggctgtgttggccatactggctgtggccatggatgtacctccc
tctacggctaagcccatcagcctggtagagaggtgctggtgtcgctccactctgaacacc
gtccctcagaggagcatcagagagctcaagttccttcacacacccaactgccctttccaa
gtcattgccaagctgaagaacaacagggaggtgtgcattaaccccgagaccaaatggctg
cagacgtacctgaagaatgccattaacaaggtgaagaagtccagaagacgtgctcagtaa
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