Oncorhynchus mykiss (rainbow trout): 110485516
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Entry
110485516 CDS
T07259
Name
(RefSeq) rano class II histocompatibility antigen, A beta chain isoform X1
KO
K06752
MHC class II antigen
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04145
Phagosome
omy04514
Cell adhesion molecule (CAM) interaction
omy04672
Intestinal immune network for IgA production
omy05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
110485516
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
110485516
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
110485516
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
110485516
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
omy04147
]
110485516
Exosome [BR:
omy04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
110485516
Exosomal proteins of epithelial cells
110485516
Exosomal proteins of breast milk
110485516
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C1-set
C2-set_2
Ig_3
MHC_II_beta
C2-set_3
Cna_B
Motif
Other DBs
NCBI-GeneID:
110485516
NCBI-ProteinID:
XP_036804029
Ensembl:
ENSOMYG00000033152
UniProt:
A0A8C7T1T6
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All DBs
Position
17:14689958..14699529
Genome browser
AA seq
259 aa
AA seq
DB search
MMACLQSYLFVVMFSFFTPTDGHFITILDLCYYRGEDPHDVEYIWRAISDMVKVMEYNST
LNRLTGYTPIGIHTAEQFNANPVVLASFQTPLHSFCKHYGALAYEAGVNNNVEPSVHLRS
MTAHGDRHPSMLTCSAYKFYPKQIRVTWLRNGQEVTSNMTSSEELANGDWHYQIHSYLEY
TPTPGEKISCMVEHASFTEPKILHWDMSLPESERSKIAIGASGLVLGVVFAAAGLLYYNR
RKTTGGDGRELVPTSHPSQ
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgatggcttgcttgcagtcatatttgtttgtggttatgttttcattcttcactccaact
gatggacactttatcaccatcctcgacctttgttattacagaggggaagatccacacgac
gtggagtacatctggagagctatttcagacatggtgaaggtcatggaatacaacagcact
ctcaatagattgactggttacacacccattgggatacatactgctgagcaatttaacgcc
aatcccgtggtcctggcatcgtttcaaactccacttcattccttctgcaaacattatggt
gccctcgcctacgaggctggagtaaacaacaacgttgagccctccgttcatctgaggtcc
atgacggcccacggtgacagacacccctccatgttgacgtgcagcgcctacaagttctac
ccaaaacagatcagggtgacctggttgaggaatggacaggaagtgacctcaaacatgact
tcctctgaggagctagccaatggcgactggcactatcagatccactcctacctggagtac
actcccacgcctggagagaagatctcctgcatggtggagcacgccagcttcactgaacca
aagatcctccactgggacatgtctctgccagagtctgagaggagtaagatagccatcggg
gcatctgggctggtgctgggggtggtctttgctgcagctggtctcctctactacaacagg
aggaagaccactggtggcgatgggagggaactggtgccaacaagtcacccatcccagtga
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