Oncorhynchus mykiss (rainbow trout): 110485539
Help
Entry
110485539 CDS
T07259
Name
(RefSeq) stromal cell-derived factor 1
KO
K10031
C-X-C motif chemokine 12
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04060
Cytokine-cytokine receptor interaction
omy04672
Intestinal immune network for IgA production
omy04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
110485539
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
110485539
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
110485539
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
omy04052
]
110485539
00536 Glycosaminoglycan binding proteins [BR:
omy00536
]
110485539
Cytokines and neuropeptides [BR:
omy04052
]
Cytokines
Chemokines
110485539
Glycosaminoglycan binding proteins [BR:
omy00536
]
Heparan sulfate / Heparin
Chemokines
110485539
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IL8
Motif
Other DBs
NCBI-GeneID:
110485539
NCBI-ProteinID:
XP_036796102
Ensembl:
ENSOMYG00000036277
UniProt:
A0A8K9XXF9
LinkDB
All DBs
Position
13:complement(11797902..11811263)
Genome browser
AA seq
99 aa
AA seq
DB search
MDVKVLAVLALLAVAMDVPPSTAKPISLVERCWCRSTLNTVPQRSIRELKFLHTPNCPFQ
VIAKLKNNREVCINPETKWLQTYLKNAINKVKKSRRRAQ
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atggatgtcaaagtactggctgtgttggccctactggctgtggccatggatgtacctccc
tctacggctaagcccatcagcctggtagagaggtgctggtgtcgctccactctgaacacc
gtccctcagaggagcatcagagagctcaagttccttcacacacccaactgccctttccaa
gtcattgccaagctgaagaacaacagggaggtgtgcattaaccccgagaccaaatggctg
cagacgtacctgaagaatgccattaacaaggtgaagaagtccagaagacgtgctcagtaa
DBGET
integrated database retrieval system