KEGG   Oncorhynchus mykiss (rainbow trout): 110485539
Entry
110485539         CDS       T07259                                 
Name
(RefSeq) stromal cell-derived factor 1
  KO
K10031  C-X-C motif chemokine 12
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy04060  Cytokine-cytokine receptor interaction
omy04672  Intestinal immune network for IgA production
omy04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:omy00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    110485539
 09140 Cellular Processes
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    110485539
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    110485539
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:omy04052]
    110485539
   00536 Glycosaminoglycan binding proteins [BR:omy00536]
    110485539
Cytokines and neuropeptides [BR:omy04052]
 Cytokines
  Chemokines
   110485539
Glycosaminoglycan binding proteins [BR:omy00536]
 Heparan sulfate / Heparin
  Chemokines
   110485539
SSDB
Motif
Pfam: IL8
Other DBs
NCBI-GeneID: 110485539
NCBI-ProteinID: XP_036796102
Ensembl: ENSOMYG00000036277
UniProt: A0A8K9XXF9
LinkDB
Position
13:complement(11797902..11811263)
AA seq 99 aa
MDVKVLAVLALLAVAMDVPPSTAKPISLVERCWCRSTLNTVPQRSIRELKFLHTPNCPFQ
VIAKLKNNREVCINPETKWLQTYLKNAINKVKKSRRRAQ
NT seq 300 nt   +upstreamnt  +downstreamnt
atggatgtcaaagtactggctgtgttggccctactggctgtggccatggatgtacctccc
tctacggctaagcccatcagcctggtagagaggtgctggtgtcgctccactctgaacacc
gtccctcagaggagcatcagagagctcaagttccttcacacacccaactgccctttccaa
gtcattgccaagctgaagaacaacagggaggtgtgcattaaccccgagaccaaatggctg
cagacgtacctgaagaatgccattaacaaggtgaagaagtccagaagacgtgctcagtaa

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