Oncorhynchus mykiss (rainbow trout): 110485635
Help
Entry
110485635 CDS
T07259
Name
(RefSeq) low-density lipoprotein receptor
KO
K12473
low-density lipoprotein receptor
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03272
Virion - Hepatitis viruses
omy04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
110485635
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
110485635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110485635
Membrane trafficking [BR:
omy04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
110485635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
DUF5050
EGF_3
EGF
hEGF
Gemini_mov
Motif
Other DBs
NCBI-GeneID:
110485635
NCBI-ProteinID:
XP_036805169
Ensembl:
ENSOMYG00000010728
LinkDB
All DBs
Position
17:20329640..20354129
Genome browser
AA seq
877 aa
AA seq
DB search
MLPTRVGITGVTACCLVLLSHCFAPTDAAYTCGTSQFRCGNGKCITSRWVCDGGDDCGDG
TDELPAACEAKTCLPTEFSCGGPLNKCISGTWHCDGKADCDNGADEKSCAAKNCTDNEFR
CSNGQCIAVSFVCDKDNDCSDGSDETSCPTATCGPNAFQCNNTVCVPRLWACDGDADCAD
GSDEWPQNCGGRDTKPTTKPCGPHEFHCGSGECIHRSWSCDGGKDCQDNSDETNCSRPTC
QPDEFQCNDGSCIHGSRQCDRQFDCRDLSDEIDCKSVDACEGPNNFRCKSGECITVDKVC
NRQKDCRDMSDEPIRECGNNECLTNNGGCSHTCTDLKIGFNCSCPAGYSLGKDNRKCEDI
DECADPDTCTQICVNILGSYKCECEEGYELDPKTKTCKAATGTVPYLLFTNRHEVRKMTL
DRSEYVPLIPSLKNVVALDMDMPGHKIFWSDLYHRKIYSADMNLAGNSSHHNVVIDSQME
APECLAVDWIHGNIYWTDSVLQTISVATTDGTRRKTLISEGLEKPRSIVVDPANNFMYWT
DWGDEAKIEKSGLNGADRVALVTDNIKWPNGITLDMVNQRLYWVDSKMHTVSSIGVNGEG
RHTLIYNEDKLAHPLSLAVFEEKVFWTDMGDRAVMSANRLTGNDITVLAEDLMQPEDIIV
YHNLKQPIGKNWCTDKNFVNGGCEFLCLPAPQINQHSPKYTCACPDHMTLGLDMRKCVAA
PTTTAPSTTPKIAAPIPTRAPTKQPAGPTSTTTTTTTTTSSARRVQPQDPDRSATTHSPQ
ETAVTGQSGYVAMPKVAEASHHTVLYIVLPIMMMCLVLFGAVLLWRHWRLKNTNTIHFDN
PVYQKTTEDELHICRNHSQDGYTYPQRQMVSLEEDLA
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgctaccgactcgtgtgggaatcaccggggtgacagcatgttgcctggtgttactttcc
cactgttttgctcctacagatgctgcgtatacatgtgggacaagtcagttcaggtgtggc
aacgggaaatgtatcaccagccggtgggtgtgtgacggaggtgatgactgtggtgacgga
actgacgagctgccagccgcctgcgaggctaagacctgcctgcccactgagttcagctgc
ggaggcccactgaacaagtgtatctccggaacgtggcactgtgatggcaaagctgactgt
gacaatggagctgatgagaagagctgtgccgcaaagaactgcaccgacaacgagttccgc
tgctccaacggtcagtgcatcgccgtctccttcgtgtgcgacaaggacaacgactgttcc
gatggttctgacgagacttcctgtcccaccgccacctgcggtcccaacgccttccagtgt
aacaacactgtgtgtgtcccgcgtctctgggcctgcgacggtgacgccgattgtgccgat
ggttcagacgagtggccccagaactgtggcgggagggacaccaaaccgacaacaaagccc
tgtgggccacatgaattccactgtgggagtggggagtgtatccacaggagttggagctgt
gatggaggcaaggactgtcaggataattcagatgaaaccaactgcagtcggcccacttgc
cagccagatgagtttcagtgtaatgatggctcctgtatccatggtagccgtcagtgtgac
cgccagtttgactgcagggatctgagtgatgagattgactgcaagagcgtggatgcgtgt
gagggcccgaataacttcaggtgtaagagtggggagtgcatcaccgtggacaaggtgtgc
aacaggcagaaagactgccgagacatgtccgacgaacctatcagggagtgtggcaacaac
gagtgtttgaccaataacggcggttgctctcacacctgtaccgacctgaagattggcttc
aattgctcctgtcctgctgggtacagtctggggaaggacaacaggaaatgtgaagacatt
gatgagtgtgctgacccagacacctgtacccagatctgtgtgaacatcctgggaagttac
aagtgtgagtgtgaggagggctatgaactggaccccaagaccaagacctgcaaggctgcc
acaggtactgtcccctacctgttgttcaccaaccgccacgaggtgaggaagatgactctg
gaccgtagcgagtacgtccctctcatccccagcctgaagaacgtggtggccctggacatg
gacatgcctggacacaagatcttctggtctgacctgtaccacaggaagatctacagcgcc
gacatgaacttggcagggaactcctcccaccacaacgtggtgattgacagccagatggag
gcgccggagtgcctggccgtcgactggattcacggtaacatctattggacggacagtgtg
ctccagaccatctccgtggcaaccacggacggaacacggcgaaagacactgatcagcgaa
ggactggagaaaccaagaagcatcgtggtggacccagccaataacttcatgtactggact
gactggggcgacgaggccaagatcgagaagagtgggctgaacggagccgaccgcgtcgcc
ttggtaacggacaacatcaagtggcctaacggcatcactcttgacatggttaaccagcgt
ctgtactgggtggactctaagatgcacaccgtctccagcatcggcgtaaacggagaagga
cgacacacactcatctacaacgaggacaagctggctcaccccctctctctcgccgtcttc
gaggagaaagtattctggaccgacatgggcgacagagcggtcatgagcgccaaccgcctg
acaggaaatgacatcactgtactggcggaggacctgatgcagccagaggacatcattgta
taccacaacctcaagcagcccatcggaaagaactggtgcacagacaaaaactttgtgaat
ggaggttgtgagttcctatgtctacctgctccccagatcaaccaacactcccccaaatac
acctgtgcctgtcctgatcacatgaccctcggcctggacatgaggaagtgtgtggcagct
ccaacaactaccgctccctccaccactcccaaaattgcagctcccatccctaccagggcc
ccaaccaaacagccagctggccccacttccaccacaactacaactaccacaactacctcc
tccgcccgccgggtccagcctcaggaccctgataggtccgcgaccactcacagtccacag
gaaactgcggtcacaggtcaaagtggctatgttgccatgcccaaagtagctgaggcatca
caccatactgtgctctacattgtcttacctatcatgatgatgtgcctggtgctgtttggt
gcagtgttactatggagacactggaggctgaagaacaccaacaccatccactttgacaac
cccgtgtaccagaagaccacagaggacgagttgcacatctgtagaaaccacagccaggac
ggatacacctacccacagagacagatggtgagcctggaagaagacctggcatga
DBGET
integrated database retrieval system