Oncorhynchus mykiss (rainbow trout): 110486074
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Entry
110486074 CDS
T07259
Name
(RefSeq) TNF receptor-associated factor 5 isoform X1
KO
K09849
TNF receptor-associated factor 5
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04217
Necroptosis
omy04621
NOD-like receptor signaling pathway
omy05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
110486074
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
110486074
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
110486074
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omy04121
]
110486074
Ubiquitin system [BR:
omy04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
110486074
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
zf-TRAF_2
TRAF3_RING
EzrA
zf-C3HC4_2
zf-C3HC4
ATG16
zf-C3HC4_4
zf-RING_2
zf-RING_UBOX
FKBP15
DUF948
Spt20_SEP
Motif
Other DBs
NCBI-GeneID:
110486074
NCBI-ProteinID:
XP_021413078
Ensembl:
ENSOMYG00000009559
LinkDB
All DBs
Position
13:complement(29623550..29634419)
Genome browser
AA seq
595 aa
AA seq
DB search
MNVDVNYKSKPRTSSHIPFLKTRLQIAMATKESDPSGSGGLSRQNSGVAGPWESDLTAVQ
HSLKFVKKLEEHYVCPTCKGVVLNPHQTGCGHIFCYRCIQGLLENSPATTPACPLDRGLI
KSDEVFQDNCCKREISNLEVYCTNSPNCSHRMTLCRLQEHLQACQFESLQCSNAGCSETM
QRKDLQEHLRISCSYRMEPCHYCKHPYTCCQLEDHERHSCPEVEIKCPNKCSQMIKRCML
EDHADQCPEVQTDCVFKKYGCFVRERRAQVQVHEETALNDHILLVLGSNTKLETQMAILQ
QEVLLRHKELQERSRQVSGLEKEVRPLAQQVSRCDNTLSAVQRSLEEQRDHISSVQLQLE
ELSNVFGPGVAREELGQIRASLDALRQQVSVTEGLKDHLGELKETYMRHSRLLSIHTAQL
ECNEEHFRELESTSYDGKLIWKLRDYRKRKEAGSQGQGPCLSSAPFHTGRSGYKMAARAY
LNGDGAGRDTHLSLYVVLMRGDFDPLLPWPFRQPVSLSVLDQSGTNNHLTMSFKPDPENT
SFHRPGSAAATTNVASGFQCFASHAQLETPKNAIYVRDDTLFVKVKVDTSGLEDL
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtggatgtaaattataaaagtaaaccaagaacatcgtcgcacattccgttttta
aagacacgcctacagattgccatggcaacaaaggagagtgacccgagtggatccggagga
ctctccaggcagaattcgggagtggcgggaccgtgggaatcggacttgactgcagtgcag
cacagtttgaagtttgtgaagaagctggaagagcactatgtttgtcccacctgtaaagga
gtagttctcaacccacaccaaaccggctgtggacacatcttctgctaccgctgcatccaa
gggctcctggaaaactccccagccaccacccctgcctgtcctttggacagaggtttgatc
aaatctgatgaggttttccaagacaattgctgcaaaagggagatctcaaatttagaagtt
tactgcacaaactcccccaactgctcccacagaatgacattatgtcggttgcaggagcat
ctacaggcatgtcagtttgagtcattgcagtgttccaatgcaggctgcagtgagaccatg
caacgtaaggacctgcaggagcacctcagaatcagctgctcctaccgtatggagccctgt
cactactgcaagcatccttacacatgctgccagctcgaggatcatgagaggcattcatgc
ccagaggttgaaatcaagtgccccaacaaatgctcccagatgattaaaagatgcatgctt
gaagaccatgctgaccagtgtcctgaggtgcagacggactgtgtttttaagaaatatggc
tgctttgtccgggaaaggagagcccaagttcaagttcatgaggaaactgctctcaatgac
catatcctcctggttctggggagcaacaccaagctggagacacagatggcaatcctccag
caggaggtgctgctgaggcacaaggagctccaggagaggagccgccaggtcagcggtctg
gagaaagaggtccgaccactggcccagcaggtcagccgatgtgacaacaccctgtctgca
gtacagaggtctctggaggagcagcgggatcacatctccagcgtccagctccagctcgag
gagttgtccaatgtgtttggccctggtgtggcccgggaggaactgggccaaatcagagcg
tccctggacgccctcagacagcaggtgtccgtcacggaggggctcaaagaccacctgggg
gagttgaaggagacctacatgcgccactcgcgcctcctcagcatccatacggcgcagctg
gagtgcaacgaggagcacttcagagagctcgagtccacctcgtacgacggcaagctcatc
tggaagctccgcgactaccgtaagagaaaggaggccgggtctcaaggccagggaccgtgc
ctgagcagcgcgcccttccacacgggccgcagtggctacaaaatggccgccagggcctac
ctgaacggcgacggggccggccgggacacccacctgtctctctacgtggtcctcatgagg
ggcgacttcgaccccctcctgccctggcccttcagacagcctgtgtcattgtcagtgctg
gaccagagcggcaccaacaaccacctgactatgagtttcaaacccgacccagaaaacact
agcttccaccggcctggctcagccgctgcaaccaccaacgtggcctctggtttccagtgc
tttgcctcgcatgcccagctggagacacccaagaacgccatctacgtgagagacgatacg
ctctttgttaaggtcaaagtagacacgagcggtttggaggacttgtag
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integrated database retrieval system
