Oncorhynchus mykiss (rainbow trout): 110486092
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Entry
110486092 CDS
T07259
Name
(RefSeq) actin, non-muscle 6.2
KO
K05692
actin beta/gamma 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03082
ATP-dependent chromatin remodeling
omy04145
Phagosome
omy04210
Apoptosis
omy04510
Focal adhesion
omy04520
Adherens junction
omy04530
Tight junction
omy04810
Regulation of actin cytoskeleton
omy04814
Motor proteins
omy04820
Cytoskeleton in muscle cells
omy05100
Bacterial invasion of epithelial cells
omy05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110486092
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
110486092
09143 Cell growth and death
04210 Apoptosis
110486092
09144 Cellular community - eukaryotes
04510 Focal adhesion
110486092
04520 Adherens junction
110486092
04530 Tight junction
110486092
09142 Cell motility
04814 Motor proteins
110486092
04820 Cytoskeleton in muscle cells
110486092
04810 Regulation of actin cytoskeleton
110486092
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
110486092
05100 Bacterial invasion of epithelial cells
110486092
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
omy03021
]
110486092
03019 Messenger RNA biogenesis [BR:
omy03019
]
110486092
03036 Chromosome and associated proteins [BR:
omy03036
]
110486092
03029 Mitochondrial biogenesis [BR:
omy03029
]
110486092
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
omy04812
]
110486092
04147 Exosome [BR:
omy04147
]
110486092
Transcription machinery [BR:
omy03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
110486092
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
110486092
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
110486092
NuA4 complex
110486092
Chromatin remodeling factors
BAF complex
110486092
PBAF complex
110486092
GBAF(ncBAF) complex
110486092
SWR1 complex
110486092
Mitochondrial biogenesis [BR:
omy03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Actin cytoskeleton organization
110486092
Cytoskeleton proteins [BR:
omy04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actins
110486092
Exosome [BR:
omy04147
]
Exosomal proteins
Proteins found in most exosomes
110486092
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
Motif
Other DBs
NCBI-GeneID:
110486092
NCBI-ProteinID:
XP_036797750
UniProt:
A0A8C7TCU0
LinkDB
All DBs
Position
13:62976416..62980693
Genome browser
AA seq
376 aa
AA seq
DB search
MVEDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
TQIMFETFNSPAMYVGIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAILRLD
LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLAYVALDFEQEMKTSASSSSLEKS
YELPDGQVITIGNERFRCPETMFQPSFIGMESTGVHETTYNSIMKCDVDIRKDLYANTVL
SGGTTMFPGIADRMQKEISGLAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK
QEYEESGPSIVHRKCF
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggttgaagatgatattgctgcactagtggttgacaatggttcaggcatgtgcaaggct
ggctttgcaggagatgatgctccccgtgctgtcttcccctccattgttggaagacccaga
catcagggtgtgatggtgggcatgggacagaaggacagctatgtgggagatgaggcccag
agcaagaggggcatcctgactctgaagtaccccatcgagcacggcattgttaccaactgg
gacgacatggagaagatctggcatcacaccttctacaacgagctgcgtgtggcccccgaa
gagcatcccgtcctgctcacagaggccccactcaaccccaaagccaacagggagaagatg
acccagatcatgtttgagaccttcaacagcccagccatgtatgtaggtatccaggccgtt
ctttctttgtacgcatctggtcgcaccacaggaatcgtgatggattctggggatggcgtt
agccacacggtgcccatctacgagggctacgctcttccccacgccatcctgcgtctggac
ctggccgggcgcgacctcacggactacctgatgaagatcctgactgagcgtggctacagc
ttcaccaccacggccgagagggagattgtgcgcgacatcaaggagaagctggcctacgtg
gcgctggactttgagcaggagatgaagacctctgcctccagttcctctctggagaagagc
tacgagctgcctgatggacaggtcatcactatcggcaacgagcgctttcggtgccctgag
accatgttccagccgtccttcattggcatggaaagcactggagtgcacgagaccacctac
aactctatcatgaagtgtgatgtggacatcaggaaagacctgtatgccaacactgttctc
tcaggtggcaccactatgttccctggcatcgctgatagaatgcagaaggagatcagtggc
ttggcacctcctactatgaagattaagatcatcgcccctcccgagcgtaaatactctgtg
tggattggcggttccatcctggcctctctctccaccttccaacagatgtggatttccaag
caggaatacgaggaatccggcccgtctatcgtccaccgcaaatgtttctaa
DBGET
integrated database retrieval system