Oncorhynchus mykiss (rainbow trout): 110486296
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Entry
110486296 CDS
T07259
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase lunatic fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy00514
Other types of O-glycan biosynthesis
omy04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
110486296
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
110486296
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
omy01003
]
110486296
Enzymes [BR:
omy01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
110486296
Glycosyltransferases [BR:
omy01003
]
Glycan extension
O-Glycan
110486296
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
110486296
NCBI-ProteinID:
XP_021413453
Ensembl:
ENSOMYG00000014845
UniProt:
A0A8C7VK73
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All DBs
Position
13:38474403..38482105
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AA seq
380 aa
AA seq
DB search
MSTSSGKKTVISITSAGFTCLLLLLVVAQHQRVQVDEVPNQREMGTRSLQSTDTLATDGV
KAAQQQVNSEAQEKKGFSAYFSKLTRGRREADKPAGSAQSATDASPAEDISADDIFIAVK
TTKKFHQSRLNLLLDTWISRNMQQTYIFTDGEDEELKKKMGSHAINTNCSAAHSRQALSC
KMAVEYDKFIESGKKWFCHVDDDNYVNTRTLVKLLSHYPHTQDMYIGKPSLDRPIEATER
LGDNKMRPVNFWFATGGAGFCVSRGLALKMSPWASGGHFMNTAEKIRLPDDCTIGYIIES
VLGVPLTRSNFFHSHLENLQQVSRSELHKQITLSYGMFENKRNIINMKGAFPVEEDPSRF
KSVHCLLYPDTPWCPLQVAY
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacaagttctggtaagaaaacggttatctctataaccagtgcaggattcacctgc
cttctgttgctcttggtggtcgcgcagcatcaaagagttcaggtagatgaggttccaaac
cagagagagatggggacgcgctcactccagagcacggacaccttggctacggacggagtg
aaggctgctcagcaacaggtcaactcggaggctcaggaaaaaaaaggattctctgcgtat
ttttccaagttgacccggggacggagagaggcggacaagcctgcagggtccgctcagtca
gcgacagatgcctcccccgcagaggacatcagtgcagatgacatcttcatcgctgtcaag
accacaaagaaattccatcagtctcgactgaatctccttctggatacctggatctctaga
aacatgcagcagacatatatcttcacagacggagaagatgaggagctgaagaagaaaatg
gggagtcacgccatcaacaccaactgttcagcagcacacagccgccaagctctatcctgc
aagatggctgtggagtacgacaagttcattgagtctgggaaaaagtggttctgtcacgtg
gatgatgataactacgttaacacgaggactctggtgaagctgctgtcccactacccccac
acccaggacatgtacattggcaagcccagcctggaccggcccatcgaggccacagagagg
ctaggagacaacaagatgcgaccagtaaacttctggtttgctactgggggagccggcttc
tgtgtgagtcgaggcctggctttgaagatgagcccatgggccagtggcggccattttatg
aacacggcagagaagattcgtctgcctgacgactgcaccatcggctacatcatcgagtcg
gtgttgggggtgcctctgacccgcagcaacttcttccactcccatctggagaacctgcaa
caggtgtccagatctgagcttcacaaacagatcacattgagttatggaatgtttgagaac
aagaggaacatcatcaatatgaaaggggctttcccagtggaggaagacccatcaaggttt
aagtctgtgcactgtttgctgtacccagacaccccttggtgcccgcttcaggttgcctac
tag
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integrated database retrieval system
