KEGG   Oncorhynchus mykiss (rainbow trout): 110486413
Entry
110486413         CDS       T07259                                 
Name
(RefSeq) RING-box protein 1
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy03420  Nucleotide excision repair
omy04110  Cell cycle
omy04114  Oocyte meiosis
omy04120  Ubiquitin mediated proteolysis
omy04141  Protein processing in endoplasmic reticulum
omy04310  Wnt signaling pathway
omy04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:omy00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    110486413
   04120 Ubiquitin mediated proteolysis
    110486413
  09124 Replication and repair
   03420 Nucleotide excision repair
    110486413
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    110486413
   04350 TGF-beta signaling pathway
    110486413
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    110486413
   04114 Oocyte meiosis
    110486413
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:omy04121]
    110486413
   03400 DNA repair and recombination proteins [BR:omy03400]
    110486413
Enzymes [BR:omy01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     110486413
Ubiquitin system [BR:omy04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   110486413
  Multi subunit type E3
   SCF complex
    Ring finger protein
     110486413
   Cul2 complex
     110486413
   Cul3 complex
     110486413
   Cul4 complex
     110486413
   Cul7 complex
     110486413
   Cul8 complex
     110486413
   Cul9 complex
     110486413
DNA repair and recombination proteins [BR:omy03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      110486413
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      110486413
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 DUF8003
Other DBs
NCBI-GeneID: 110486413
NCBI-ProteinID: XP_021413681
LinkDB
Position
13:complement(42453094..42456995)
AA seq 108 aa
MAAAMDVDTPSATNSGASKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq 327 nt   +upstreamnt  +downstreamnt
atggcggcagcgatggatgttgataccccaagcgccacgaatagtggagcaagcaagaaa
cgttttgaagtgaagaagtggaatgcagtggcactttgggcctgggacattgtcgtggac
aactgtgccatctgtaggaatcacattatggatctctgcatagagtgccaggctaaccag
gcctctgccacatcagaggagtgcaccgtagcctggggagtctgcaatcatgcattccat
ttccactgtatctctcgttggttgaagaccaggcaggtgtgccccctagacaacagggag
tgggagtttcagaaatatggacactag

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