Oncorhynchus mykiss (rainbow trout): 110486413
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Entry
110486413 CDS
T07259
Name
(RefSeq) RING-box protein 1
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03420
Nucleotide excision repair
omy04110
Cell cycle
omy04114
Oocyte meiosis
omy04120
Ubiquitin mediated proteolysis
omy04141
Protein processing in endoplasmic reticulum
omy04310
Wnt signaling pathway
omy04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
110486413
04120 Ubiquitin mediated proteolysis
110486413
09124 Replication and repair
03420 Nucleotide excision repair
110486413
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
110486413
04350 TGF-beta signaling pathway
110486413
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
110486413
04114 Oocyte meiosis
110486413
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omy04121
]
110486413
03400 DNA repair and recombination proteins [BR:
omy03400
]
110486413
Enzymes [BR:
omy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
110486413
Ubiquitin system [BR:
omy04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
110486413
Multi subunit type E3
SCF complex
Ring finger protein
110486413
Cul2 complex
110486413
Cul3 complex
110486413
Cul4 complex
110486413
Cul7 complex
110486413
Cul8 complex
110486413
Cul9 complex
110486413
DNA repair and recombination proteins [BR:
omy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
110486413
TCR (transcription coupled repair) factors
Cul4-CSA complex
110486413
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_11
DUF8003
Motif
Other DBs
NCBI-GeneID:
110486413
NCBI-ProteinID:
XP_021413681
LinkDB
All DBs
Position
13:complement(42453094..42456995)
Genome browser
AA seq
108 aa
AA seq
DB search
MAAAMDVDTPSATNSGASKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq
327 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagcgatggatgttgataccccaagcgccacgaatagtggagcaagcaagaaa
cgttttgaagtgaagaagtggaatgcagtggcactttgggcctgggacattgtcgtggac
aactgtgccatctgtaggaatcacattatggatctctgcatagagtgccaggctaaccag
gcctctgccacatcagaggagtgcaccgtagcctggggagtctgcaatcatgcattccat
ttccactgtatctctcgttggttgaagaccaggcaggtgtgccccctagacaacagggag
tgggagtttcagaaatatggacactag
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integrated database retrieval system