Oncorhynchus mykiss (rainbow trout): 110486813
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Entry
110486813 CDS
T07259
Name
(RefSeq) E3 SUMO-protein ligase CBX4
KO
K11452
E3 SUMO-protein ligase CBX4 [EC:2.3.2.-]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
110486813
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omy04121
]
110486813
03036 Chromosome and associated proteins [BR:
omy03036
]
110486813
Ubiquitin system [BR:
omy04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
110486813
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
110486813
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Chromo
CBX7_C
Mtf2_C
Motif
Other DBs
NCBI-GeneID:
110486813
NCBI-ProteinID:
XP_036797432
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All DBs
Position
13:54701105..54710557
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AA seq
651 aa
AA seq
DB search
MKCSCSLTSVDCGYLSAYCLRARTQRECVCERERGEGKRATERARRSEREEWWRDYSLVS
YNWKITKGENAPSERRHQRISTFVRFKRIQARMELPAAGEHVFAVEGIEKKRIRKGKIEY
LVKWRGWSPKYNTWEPEENILDPRLLVAFQNRERQEQLMGYRKRGPKPKHLLVQLPSFAR
RSSIPAGFEETSPEAENYLRSDPIQTHRSQPQQYQLNSKKHHQYQPSKQEVSADQLGNGK
KKLFYQLNSKKHHHYQPDPNMYNTQSTRPKDMVKGQEPSPPTNPNPGWNLPPALQQKWVR
DKNTGCLSKVKDVTVVEMKKAAVRVNEAESECALKPSPKEAALPSAVSSKMKIIKNKNKN
GRIVIVMSKYMDGNKAGAAKGKHSSDLTGEEKPQHAEQSDMSKVQGTTNVPKEICNASST
PAAEHPKKRSPEDGHFSKPSPSTAEEYNTEVARGQADLPDDHPLQLTTNPTPSPWAMDTS
LPTPSPMDQTRTLPTTNNDRKRKLSHPEEDRGACKTFLSSRSISVPSAVPTPPQDKPMDL
HLIVPRRSSSSGYGYEITDTSISQEEPMDLSCSRTRKQPEPEPEPEPEHKDPTAVVQESE
TTTTTTTTATTTTEEAKEESVLMFSPFMGNIVITDITTNCLTVTFKEYVSV
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgttcttgcagcctcactagtgtggactgtggatatctttctgcttactgcctt
cgagccaggacccagcgagagtgtgtgtgtgagagagagagaggagagggcaagagagcg
acagagcgagcgagaaggagcgagagagaggagtggtggagggattacagtttggtttct
tataactggaaaattaccaaaggagagaacgcaccgagtgaacgaaggcatcaacgtatt
tcaacgttcgttcgcttcaaacggattcaagccagaatggagctacctgccgcaggagag
cacgtctttgcggtggagggtatcgaaaagaagcgcattcggaagggcaaaatagaatac
ctggtaaagtggagagggtggtctcccaaatacaacacatgggaacccgaggaaaacatc
cttgacccgcgccttctcgtggcgttccaaaacagagagagacaggaacagttgatggga
tatcgtaaacgtggaccaaaaccaaaacatctcttagtccagcttccctcgtttgcacgg
agatccagcatccctgctggatttgaggagacgtctccagaggccgagaactacctcagg
tcagacccgatccagacgcaccgctcccagccccaacagtaccagctgaacagcaagaag
caccaccagtaccagcccagcaaacaggaagtctcagcggaccagctgggcaacgggaag
aagaagttattctatcagctcaacagcaagaaacaccaccactaccagcctgaccctaat
atgtacaacacccagtccaccaggcccaaagacatggtcaaaggtcaggaacccagtccg
cccaccaatcccaaccctgggtggaacctgccaccggcactgcagcagaaatgggttcgc
gacaaaaacacgggctgcctgagcaaagtcaaagacgtgacggtggtggagatgaagaaa
gcagcggtgcgtgtcaacgaggctgagagcgaatgcgccctgaagcccagcccaaaggag
gcagccctacccagtgctgtcagcagcaagatgaagatcatcaagaacaagaacaagaat
ggacgcattgtcatcgtcatgagcaagtacatggacggcaacaaggctggggcggccaag
ggtaaacactcttcagacttgactggagaagagaaacctcaacacgctgagcagtcagac
atgtccaaggtacagggaaccaccaatgtccctaaagagatctgtaatgccagttccacg
ccggccgctgagcatcccaagaaacgctctccagaagacggacatttctccaaaccatcg
cccagcacggctgaggaatacaacacagaggttgcgaggggccaggcggacttaccggat
gatcaccccctacagctaaccaccaacccaaccccttccccctgggcgatggatactagc
ctccccacccctagccctatggaccagacacggacactccccaccacaaataacgaccgc
aaacgcaagctctcccaccccgaggaggacaggggcgcgtgtaaaacgtttctgagctcc
aggagcatcagtgtccccagtgctgtgcccactccgccccaggacaaacccatggacctc
cacctcattgtcccccgccggagcagcagtagcgggtatgggtatgagattacggacacc
agcatcagtcaggaagaacctatggatcttagctgttctagaaccagaaagcaacctgaa
cctgagccagagccagaaccggagcataaggatccaactgcagtggtacaggagtcagag
acaacaacaacgacaacaacaacagcaacaacaacaacagaggaggctaaagaagagtct
gtcttaatgttctctccttttatgggcaacattgtcatcactgacatcaccacgaactgt
ctcacggtcacttttaaggaatacgtttctgtttaa
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