Oncorhynchus mykiss (rainbow trout): 110487634
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Entry
110487634 CDS
T07259
Name
(RefSeq) exostosin-1b-like
KO
K02366
glucuronyl/N-acetylglucosaminyl transferase EXT1 [EC:
2.4.1.224
2.4.1.225
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
omy01100
Metabolic pathways
Module
omy_M00059
Glycosaminoglycan biosynthesis, heparan sulfate backbone
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
110487634
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
omy01003
]
110487634
Enzymes [BR:
omy01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.224 glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase
110487634
2.4.1.225 N-acetylglucosaminyl-proteoglycan 4-beta-glucuronosyltransferase
110487634
Glycosyltransferases [BR:
omy01003
]
Glycan extension
O-Glycan
110487634
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_64
Exostosin_GT47
RXYLT1_C
Motif
Other DBs
NCBI-GeneID:
110487634
NCBI-ProteinID:
XP_036826932
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All DBs
Position
32:37099833..37195775
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AA seq
740 aa
AA seq
DB search
MQAKKRYLILLSAGTCLVLLFYFGGVQLPSSGRNRHDRSHNGYRPDQPWPHFSDPLQQFL
LWDQPDTEEYNIHISPRQKRDVNTSVYKGKRCRMDSCFDFSACKRNDFKVYVYPQQKGEK
ISESYQNILSIVEGSRFYTTDPGQACLFILSLDTLDRDSLSPQYVHNLKTKVQNLHLWNN
GRNHLIFNLYSGTWPDYTEDLGFDIGQAMLAKASISTEIFRPNFDVSIPLFSKEHPRTGG
DRGYLKYNSIPPFRKYMLVFKGKRYLTGIGSDTRNALYHVHNQEDVVLLTTCKHGKDWQK
HKDARCEKDNAEYDKYDYREMLHNSTFCLVPRGRRLGSFRFLEALQAACVPVMLSNGWEL
PFSEIINWNTAAVIGDERLLLQIPSTVRSIHQDKILALRQQTQFLWEAYFSSVEKIVLTT
LEIIQDRVLQQESRSTLMWNSHPGGLFALPQYSAHLGDFPFYYATLGIKPYPKFTAVIHA
VTPLVSQSQPILKLLVSVAKSQYCAQIIVLWNCDKPLPAKHRWPATSVPVIVIEGENKVM
SSRFLPYETIVTDAVLSLDEDTVLSTTEVDFAFTVWQSFPERLVGYPARSHFWDSNKERW
GYTSKWTNDYSMVLTGAAIYHRYYHFLYTNFLPASLKGMVDQLANCEDILMNFLVSAVTK
LPPIKVTQKKQYKETMMGQSSRASRWADPDHFAQRQTCMNKFANWFGGMPLVHSQMRLDP
VLFKDQVSILRKKYRDIERL
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgcaggccaaaaaacgatatttaatcctgctctctgccggtacatgtctagttctactg
ttctactttggaggtgtacaacttccatcttcgggcaggaaccggcatgaccggagccat
aatggatatcgccccgaccagccgtggccacacttctcggaccctttacaacaattccta
ctctgggatcaaccggacaccgaggaatacaacattcacatatcgccaaggcaaaagagg
gacgttaacacaagtgtgtacaaaggcaaaagatgtcgcatggattcgtgctttgatttc
tcagcatgcaaaaggaacgatttcaaagtgtatgtctacccccagcagaaaggggagaaa
atctccgaaagttaccagaatattttgtcgattgttgagggatccaggttctacaccact
gacccgggtcaagcttgtctattcatcctgagcttggacaccctggaccgggactcgctg
tctccgcagtacgtgcacaatctcaaaaccaaggtccagaaccttcatctctggaacaac
ggcagaaaccacctcatatttaacttgtactctgggacatggccggactacacggaagac
ctaggtttcgacataggccaggccatgttggccaaggccagcatcagtaccgagatcttc
aggcccaactttgacgtgtccatcccgctgttctccaaggagcaccctaggaccggaggg
gacagggggtacctaaagtacaactccatcccacctttcaggaaatacatgctcgtgttt
aaggggaagcgataccttacagggatagggtcagacacgaggaatgccttatatcatgtc
cataaccaggaggacgtggtgctcctcaccacctgcaaacacggcaaggattggcagaaa
cacaaggacgcacgctgtgaaaaggacaacgcagaatatgacaaatacgactacagagag
atgctacacaactccactttctgcctggtgccccggggcagacgcctgggatcctttcgc
ttcctggaggcgctgcaagcagcctgtgtgcctgtgatgctgagtaacggctgggagctg
cccttctctgagatcatcaactggaacacggcggccgtcatcggggacgagaggctcctg
ttgcagatcccatccacggtgcgctccatccatcaggataagatcctagctctgaggcag
cagacccagttcctttgggaggcctacttctcctctgtggagaagattgtgctgaccact
ctggagatcatccaggaccgggtgctgcagcaggagtccaggagcaccttgatgtggaac
agccaccccggggggctcttcgccctcccacagtactctgcccacctgggagacttcccc
ttctactacgccaccctaggtataaaaccgtaccccaagttcacagcagtcatccatgca
gtcacccccctggtctcccaatcccagcccatcctcaagctgctggtgtctgttgccaaa
tcacagtactgtgcacagatcattgtgctgtggaactgtgacaagcctctccctgctaag
caccgctggcctgccacctccgtgcccgtcattgtcatcgagggagaaaacaaggtgatg
agcagtcgcttcctgccctacgagaccattgtcaccgacgctgtgctcagtctggatgag
gatacggtgctctcgaccacagaggtggactttgccttcacggtgtggcagagctttcca
gagaggttggtgggctacccggcccggagccacttctgggacagtaacaaggagcgctgg
ggctacacttccaagtggaccaacgactactccatggtgctgaccggagctgccatctac
cacagatattaccacttcctttacacaaacttcctgcctgccagcctgaagggcatggtg
gaccagctggccaactgtgaggacatcctcatgaacttcctggtgtccgccgtcaccaag
ctgccgcccatcaaggtcacccagaagaagcagtacaaagagaccatgatgggacagtcg
tcgcgggcttcgcgctgggccgacccggaccacttcgcccagcggcagacgtgcatgaac
aagttcgccaactggtttggcggcatgcccctggtccactcccaaatgaggctggacccg
gtgctgttcaaggaccaggtctccatcctgcgcaagaaatacagggacatcgagaggctc
tga
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