Oncorhynchus mykiss (rainbow trout): 110487866
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Entry
110487866 CDS
T07259
Symbol
tap1
Name
(RefSeq) antigen peptide transporter 1
KO
K05653
ATP-binding cassette, subfamily B (MDR/TAP), member 2 [EC:
7.4.2.14
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy02010
ABC transporters
omy04145
Phagosome
omy05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
110487866 (tap1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
110487866 (tap1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
110487866 (tap1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
omy02000
]
110487866 (tap1)
Enzymes [BR:
omy01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.14 ABC-type antigen peptide transporter
110487866 (tap1)
Transporters [BR:
omy02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
110487866 (tap1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
ABC_ATPase
AAA_22
RsgA_GTPase
AAA_29
Rad17
AAA_25
Motif
Other DBs
NCBI-GeneID:
110487866
NCBI-ProteinID:
XP_021415459
Ensembl:
ENSOMYG00000002497
LinkDB
All DBs
Position
2:33733444..33746441
Genome browser
AA seq
725 aa
AA seq
DB search
MPKMNFSPLLFLCMDVCVVQTVRLAQLSPLLLHHPLITLWGGSLLRAGLHLFLTFKFPGS
TPWMSSFEGLQSMGVLCFHCPLYISLLWACGQSILGQLWGWHSWQGLLQGYCVTVVACLY
WTRYVPSLLTKPTKEPQKKTGASLEKLMGYMKPYFIRFGAVLSLVVISSLGEMAIPHYTG
RMTDWIMNEDEPEAFTHAITVMSLITVMSAVCEFVCDLIYNITMSRIHTSIQGLVFQSVL
KQEIAFFDTAQTGDLVSRITTDTNDMSESLSEKLSLLMWYFMRVTFLFIFMLNLSWKLSL
FTAMGLPIIWVIPKISGKWYQELGAKVQKSLAQANDVATETFSSMKTVRSFANEEGETER
YRKRLEKTYSLNKEEAAAYAASTWTNSMSSLFLKVSILYYGGSLVTGGTVSSGDLVAFVL
YELQFSSAVEAVMSYYPSVMRAIGGSEKIFEYVDRQPQVPPEGTLAPQNLEGHVEFKNVT
FTYPTREDTPVLKGLSLELRPGQITALVGASGAGKSTCVSLLERFYLPQEGEILLDGQPL
HSYKNQYLHDKISVVSQEPVLFARSVKENIKYGRDDATDEEMYRAAELANAHKFISDLPN
GYDTDAGEKGGQVSGGQKQRIAIARALIRKPRILVLDDATSNLDTESEHLVHQALLKDSN
PCSVLLIAHKLSTVEKANHIVVLEEGKVLEEGSHVELLEKGGTYADLVNKQNTGFQRKEG
EELKN
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaaatgaacttctctccgctgctcttcctgtgcatggatgtgtgtgtggtgcag
acagtccgcttggcccaactctcccctcttctcctccaccatcccctcatcaccttgtgg
ggtggaagcctgctccgtgccggcctccacctctttctcaccttcaaattccctggaagt
accccatggatgagcagctttgaggggctccagagcatgggggtcctctgcttccattgc
ccactctacatcagccttctctgggcatgtggccagtccatcctggggcaactatgggga
tggcactcctggcaggggctacttcagggctactgcgtaacagtcgtagcatgtttgtac
tggacacgctacgtcccttctcttcttaccaagcccaccaaggaaccacagaagaagact
ggggcctctctagagaaactgatgggatacatgaagccttatttcatacgctttggagcc
gtgctgagtcttgtcgtcatctcctcccttggtgagatggctattccccactacaccggc
cgaatgacagactggattatgaatgaagacgagcctgaagcctttactcacgccatcacg
gtcatgtctctgattacagtcatgagtgctgtgtgtgagtttgtgtgtgacctcatctac
aacatcaccatgagtcgcatacacacctccatccagggcctagtcttccagtcggtgctg
aagcaggagattgctttctttgacacagcacagacaggtgaccttgtgtcacgcatcacc
acagacaccaacgacatgagtgagtctctgagtgagaagttgagtctgctgatgtggtac
ttcatgcgggtcactttcctcttcatcttcatgctcaatctctcctggaagctgtccctc
ttcaccgctatggggcttcctatcatctgggtcataccaaagatatccggcaagtggtac
caggagctcggtgcgaaggttcaaaagtcactagcccaggccaatgacgttgccacggag
accttctcctctatgaagacagtacgcagctttgccaacgaggagggcgagacagagcgc
tacaggaagaggctggagaagacctactctctgaataaagaggaagcagcagcctacgca
gcttcaacctggaccaatagtatgtcaagcctgttcctgaaggtcagtatcctgtactat
ggcggtagtctggtgacaggggggaccgtcagcagtggggacctggtggcctttgtgctc
tacgagctccaattctcctctgctgtggaggccgtgatgtcgtattacccaagtgtgatg
agggcaatcggtggctctgagaagatattcgagtatgtggaccgacagccccaagttcct
ccagaaggcacccttgccccacagaatcttgagggacatgttgagttcaagaatgtcaca
tttacctaccctaccagggaagatacaccggtgctcaagggcctgtctctggagctgagg
cctgggcagatcactgccttggtgggggcttctggagcagggaaaagcacctgtgtgagc
ctgctggagaggttctacctgccccaggaaggagagatcctattggatggacagccactg
cacagctacaagaaccagtacctacacgacaagatcagtgtggtgagtcaggagccggtg
ttgtttgctcgttctgtcaaggagaacatcaaatatggcagagatgatgccactgatgag
gagatgtaccgggctgctgagctggcaaacgcccacaagttcatctctgacctgcccaat
ggctatgatacagatgccggggagaagggaggccaggtttcaggagggcagaagcaacgc
atagccatcgccagagctttgatcagaaagcctcggattctagtgctggacgatgccacc
agtaacttggacacagagagcgagcatttggtccaccaagctctgctcaaggactcaaac
ccctgctcagtgctgctgattgctcataagctgagcactgtggagaaggccaatcacatt
gtcgttcttgaggagggaaaggtgctagaggaggggagccatgttgagctgctggagaaa
ggtggaacctatgctgacctggtgaacaagcagaacactggcttccagcgcaaagaaggg
gaggagctgaaaaactaa
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