KEGG   Oncorhynchus mykiss (rainbow trout): 110488672
Entry
110488672         CDS       T07259                                 
Name
(RefSeq) protocadherin gamma-C5-like
  KO
K16497  protocadherin gamma subfamily C
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:omy00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:omy04515]
    110488672
Cell adhesion molecules [BR:omy04515]
 Cadherins
  Protocadherins
   110488672
SSDB
Motif
Pfam: Cadherin Cadherin_2 Cadherin_C_2
Other DBs
NCBI-GeneID: 110488672
NCBI-ProteinID: XP_021416659
LinkDB
Position
14:complement(7471107..7474537)
AA seq 824 aa
MTKRMGYRNWRWLALWWRHFILLWTTIDGQTRYTIPEELKQGSVVGNLAKDLGLGLSEIF
DRKLHVASEAGKQYFNVDAGKGELVVNERIDRETLCGPSARCVLPLQVVIENPLQLHRIE
VEIRDINDNSPNFLTKYRVLKMAELTAVGARFPLKSAEDPDVGSNSLKSYILSKDECFSV
KVKDIEGGRKIPELVLEKPLDREKKAVHELLLTALDGGTPARSGTSQITVIVLDNNDNNP
VFQKAVYNVRVNENSEKGTSLLKLEATDSDEGVNGEIEYSFGEHTLESVLSVFDIDAVTG
EMFLKGELDYESAAYYRIDITAVDKGIPEMEGHCRVQVEVTDVNDNAPEIVLTSKPSPVR
EDAPSGTVVALISARDLDSGNNGKVTLQLTKGHPFSLKPSFSDNYALVTSGVLDRESFSE
YNIEITATDSGSPPLTTKKTIPVSIIDVNDNPPKFSQSSYNVYLKENGPPGSMLSSVSTS
DLDFGDNAKISYSILDSKVQDVSVSSYVYINSDNGSIYSMHSYDYEKLKVFQIHVQAKDH
GSPSLSSNATVHVFILDQNDNAPAVIYPSAALGSLSHQNMPRSAKAGHLVTKVTAVDADS
GHNAWISYKLVEATDTSLFSVNLYTGEVRTKRAVSEQDDSSQRLLIEIHDDGEPVQSTTV
TLAILVEDGLHEPILDLRQKAPEASKKNPRITLYLILSLASVSVLSMVTFIILAVKCVRN
SRSSGSCCMRRDDLDGYKNPNRNLQIQLNTDGPIKYVEVLGGDMLSQSQSFRSCLSPMSE
FSDFTFVKPSSTTDFKEMINVLDASLPDSAWTFESQQVRSDVGL
NT seq 2475 nt   +upstreamnt  +downstreamnt
atgacaaagagaatgggataccgaaactggagatggttggctctttggtggcgtcatttc
attctcttatggactacaatagacggacagactcgctacaccatcccggaggaactgaaa
cagggctctgtggtaggaaatctagccaaagatctgggtttgggactctctgagattttt
gaccgtaaactgcatgtcgcctctgaggctggtaagcagtatttcaatgtggatgcgggg
aagggcgagctggtcgtcaatgagagaatagacagagagacgttatgcggaccaagtgcc
agatgcgttttacctctgcaggttgtcattgagaacccgttacagttgcaccgtattgag
gtggaaatacgagacataaatgacaattctcctaatttcttaacaaaatatcgtgttctg
aaaatggctgaattgacagctgtaggcgcgcgttttccgttgaaaagtgcagaggacccc
gacgtgggaagcaattcacttaaatcctacattcttagtaaagacgaatgtttcagtgta
aaagttaaagacattgaaggaggacgaaaaatcccagagttagtgttagagaagccactg
gacagagagaaaaaagctgtccatgagctattattgacggctctagatggaggcactccg
gctaggtctggaacttcacagatcacggtcattgtccttgataataatgacaataatccc
gtatttcagaaagctgtatataatgtaagggttaatgaaaatagcgaaaagggcacttcc
ttgctcaagcttgaggctactgactcagacgagggtgtcaacggggagatagaatattca
ttcggcgagcatacactagagtcagtgttatctgtgtttgatattgatgcagtaacgggg
gaaatgtttctaaagggggaattagattatgagagtgcagcttattatcgtatagacatt
actgcagtagataaaggcatcccagaaatggagggacactgtcgggtacaggtcgaagta
acagacgttaatgacaatgctcccgaaattgtcctcacctccaaacctagtccagtgcgc
gaggacgcaccgagtggcacggtagtggctttgatcagtgcccgtgacctagactccggg
aataacggtaaagtaacgttacaacttacaaaaggccatcctttcagtttgaaaccgtca
ttttctgataattatgcactggtcaccagtggtgttttagacagagagagtttctcagag
tataatattgagataacagccactgattcaggttcccctcccctgactaccaagaaaact
ataccagtcagcatcattgatgtcaacgacaacccccctaaattcagccagtcctcatat
aatgtctatttaaaagagaatggaccaccaggctcaatgctctcctcagtatctacatct
gacctggatttcggggataatgccaagatttcctactccatcttagactccaaagtgcag
gacgtgtctgtatcctcctatgtgtacataaactctgacaacggcagcatctacagcatg
cactcatacgactatgagaaactaaaggtgtttcagattcatgtgcaggcaaaggaccac
ggctctccctctctgagcagcaacgccactgtccatgtttttatcctggaccagaacgac
aacgcccccgctgttatttacccctctgctgccctgggctcgctctctcaccagaacatg
ccccgctccgctaaagcaggccacttggttactaaggtaacggctgtggacgcagactcg
ggccataacgcctggatctcatataaactggtggaggccacagacacgtctctgttcagt
gtcaatctttacacaggggaggtgaggactaaacgcgctgtgtccgagcaggacgactcc
tctcagaggctgcttatagagatacacgatgacggggagccggtccagtccaccacggtc
actttggccatactggtagaggacgggctccatgaacccatcttggacctccggcagaaa
gcgccagaggctagcaagaaaaacccgagaatcaccctgtatttgattctctctctggcc
tcggtgtccgtcctgtccatggtgaccttcatcatcttagcagtcaagtgcgttagaaac
agcaggagcagcggtagttgctgcatgagacgggacgatttggacggctacaagaatccc
aacagaaacctgcagattcagctcaacactgacgggccgattaagtacgtggaggtccta
ggaggggacatgttgtctcagagtcagtccttcaggtcctgtctctctcccatgtcagag
ttcagtgatttcaccttcgttaagcccagcagcaccactgactttaaggagatgatcaac
gtcctagacgcgtctttacccgacagcgcctggacctttgagagccagcaggtgagaagt
gacgtcggtctataa

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