Oncorhynchus mykiss (rainbow trout): 110488672
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Entry
110488672 CDS
T07259
Name
(RefSeq) protocadherin gamma-C5-like
KO
K16497
protocadherin gamma subfamily C
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omy04515
]
110488672
Cell adhesion molecules [BR:
omy04515
]
Cadherins
Protocadherins
110488672
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
110488672
NCBI-ProteinID:
XP_021416659
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All DBs
Position
14:complement(7471107..7474537)
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AA seq
824 aa
AA seq
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MTKRMGYRNWRWLALWWRHFILLWTTIDGQTRYTIPEELKQGSVVGNLAKDLGLGLSEIF
DRKLHVASEAGKQYFNVDAGKGELVVNERIDRETLCGPSARCVLPLQVVIENPLQLHRIE
VEIRDINDNSPNFLTKYRVLKMAELTAVGARFPLKSAEDPDVGSNSLKSYILSKDECFSV
KVKDIEGGRKIPELVLEKPLDREKKAVHELLLTALDGGTPARSGTSQITVIVLDNNDNNP
VFQKAVYNVRVNENSEKGTSLLKLEATDSDEGVNGEIEYSFGEHTLESVLSVFDIDAVTG
EMFLKGELDYESAAYYRIDITAVDKGIPEMEGHCRVQVEVTDVNDNAPEIVLTSKPSPVR
EDAPSGTVVALISARDLDSGNNGKVTLQLTKGHPFSLKPSFSDNYALVTSGVLDRESFSE
YNIEITATDSGSPPLTTKKTIPVSIIDVNDNPPKFSQSSYNVYLKENGPPGSMLSSVSTS
DLDFGDNAKISYSILDSKVQDVSVSSYVYINSDNGSIYSMHSYDYEKLKVFQIHVQAKDH
GSPSLSSNATVHVFILDQNDNAPAVIYPSAALGSLSHQNMPRSAKAGHLVTKVTAVDADS
GHNAWISYKLVEATDTSLFSVNLYTGEVRTKRAVSEQDDSSQRLLIEIHDDGEPVQSTTV
TLAILVEDGLHEPILDLRQKAPEASKKNPRITLYLILSLASVSVLSMVTFIILAVKCVRN
SRSSGSCCMRRDDLDGYKNPNRNLQIQLNTDGPIKYVEVLGGDMLSQSQSFRSCLSPMSE
FSDFTFVKPSSTTDFKEMINVLDASLPDSAWTFESQQVRSDVGL
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagagaatgggataccgaaactggagatggttggctctttggtggcgtcatttc
attctcttatggactacaatagacggacagactcgctacaccatcccggaggaactgaaa
cagggctctgtggtaggaaatctagccaaagatctgggtttgggactctctgagattttt
gaccgtaaactgcatgtcgcctctgaggctggtaagcagtatttcaatgtggatgcgggg
aagggcgagctggtcgtcaatgagagaatagacagagagacgttatgcggaccaagtgcc
agatgcgttttacctctgcaggttgtcattgagaacccgttacagttgcaccgtattgag
gtggaaatacgagacataaatgacaattctcctaatttcttaacaaaatatcgtgttctg
aaaatggctgaattgacagctgtaggcgcgcgttttccgttgaaaagtgcagaggacccc
gacgtgggaagcaattcacttaaatcctacattcttagtaaagacgaatgtttcagtgta
aaagttaaagacattgaaggaggacgaaaaatcccagagttagtgttagagaagccactg
gacagagagaaaaaagctgtccatgagctattattgacggctctagatggaggcactccg
gctaggtctggaacttcacagatcacggtcattgtccttgataataatgacaataatccc
gtatttcagaaagctgtatataatgtaagggttaatgaaaatagcgaaaagggcacttcc
ttgctcaagcttgaggctactgactcagacgagggtgtcaacggggagatagaatattca
ttcggcgagcatacactagagtcagtgttatctgtgtttgatattgatgcagtaacgggg
gaaatgtttctaaagggggaattagattatgagagtgcagcttattatcgtatagacatt
actgcagtagataaaggcatcccagaaatggagggacactgtcgggtacaggtcgaagta
acagacgttaatgacaatgctcccgaaattgtcctcacctccaaacctagtccagtgcgc
gaggacgcaccgagtggcacggtagtggctttgatcagtgcccgtgacctagactccggg
aataacggtaaagtaacgttacaacttacaaaaggccatcctttcagtttgaaaccgtca
ttttctgataattatgcactggtcaccagtggtgttttagacagagagagtttctcagag
tataatattgagataacagccactgattcaggttcccctcccctgactaccaagaaaact
ataccagtcagcatcattgatgtcaacgacaacccccctaaattcagccagtcctcatat
aatgtctatttaaaagagaatggaccaccaggctcaatgctctcctcagtatctacatct
gacctggatttcggggataatgccaagatttcctactccatcttagactccaaagtgcag
gacgtgtctgtatcctcctatgtgtacataaactctgacaacggcagcatctacagcatg
cactcatacgactatgagaaactaaaggtgtttcagattcatgtgcaggcaaaggaccac
ggctctccctctctgagcagcaacgccactgtccatgtttttatcctggaccagaacgac
aacgcccccgctgttatttacccctctgctgccctgggctcgctctctcaccagaacatg
ccccgctccgctaaagcaggccacttggttactaaggtaacggctgtggacgcagactcg
ggccataacgcctggatctcatataaactggtggaggccacagacacgtctctgttcagt
gtcaatctttacacaggggaggtgaggactaaacgcgctgtgtccgagcaggacgactcc
tctcagaggctgcttatagagatacacgatgacggggagccggtccagtccaccacggtc
actttggccatactggtagaggacgggctccatgaacccatcttggacctccggcagaaa
gcgccagaggctagcaagaaaaacccgagaatcaccctgtatttgattctctctctggcc
tcggtgtccgtcctgtccatggtgaccttcatcatcttagcagtcaagtgcgttagaaac
agcaggagcagcggtagttgctgcatgagacgggacgatttggacggctacaagaatccc
aacagaaacctgcagattcagctcaacactgacgggccgattaagtacgtggaggtccta
ggaggggacatgttgtctcagagtcagtccttcaggtcctgtctctctcccatgtcagag
ttcagtgatttcaccttcgttaagcccagcagcaccactgactttaaggagatgatcaac
gtcctagacgcgtctttacccgacagcgcctggacctttgagagccagcaggtgagaagt
gacgtcggtctataa
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