Oncorhynchus mykiss (rainbow trout): 110489126
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Entry
110489126 CDS
T07259
Name
(RefSeq) E3 ubiquitin-protein ligase XIAP isoform X1
KO
K04725
E3 ubiquitin-protein ligase XIAP [EC:
2.3.2.27
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04120
Ubiquitin mediated proteolysis
omy04210
Apoptosis
omy04217
Necroptosis
omy04510
Focal adhesion
omy04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110489126
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
110489126
04217 Necroptosis
110489126
09144 Cellular community - eukaryotes
04510 Focal adhesion
110489126
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
110489126
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
omy01002
]
110489126
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omy04121
]
110489126
03029 Mitochondrial biogenesis [BR:
omy03029
]
110489126
Enzymes [BR:
omy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110489126
Peptidases and inhibitors [BR:
omy01002
]
Peptidase inhibitors
Family I32: IAP family
110489126
Ubiquitin system [BR:
omy04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110489126
Mitochondrial biogenesis [BR:
omy03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
110489126
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BIR
zf-C3HC4_3
UBA_BIRC2-3
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
110489126
NCBI-ProteinID:
XP_021417384
Ensembl:
ENSOMYG00000019258
UniProt:
A0A8C7QPL3
LinkDB
All DBs
Position
14:31326015..31332941
Genome browser
AA seq
463 aa
AA seq
DB search
MSGPGRDGDMESDHAVDWSMMDMRLDSFRGSLLAQQVSAERLARAGFYFTGQADKVRCFS
CHKTVENWCGGDAPVERHAEVSPSCKFLSCTHRSRVNSLQGAMLTNETSYNEDAEDMEFR
LRTGEVVDDTTYPMAPHMASEDSRFNTFGPWPSTSPVRPRELAQAGLFYLGEGDQVQCFC
CGRMLKGWEAGDTAWGEHSKHYPYCFFILGHDVGNLPSQRGREVEETRPCPGPRVPMQSF
EERLGSFAGIQHHPIDHERLARAGFYNIGAPDHVQCFHCGGGLKGWQQDEDPWEEHAKHY
PGCSFLLAEKGQEFVSSVQLQGPGRNNAASSHLNGCSSHETEVLQSANAQKAVEMGLEPA
LVERTIQERLRRDGTGYSTLETLLQDCFNRDPDSDAENHDEGPLEKLRKLQREKQCKVCM
DRDICIVFIPCGHLVVCKECSEALDKCPICCCAITQKIKTYIS
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggccccgggagagacggtgatatggagtcagaccacgcagtagactggtccatg
atggacatgcggctggactcattccggggttccctcctggcccagcaggtgtcagcggag
aggctggcccgcgcagggttctacttcacgggacaggccgacaaggtgcgctgcttcagt
tgccacaagactgtagagaactggtgtggaggtgacgcacccgtggagaggcacgcggag
gtctcccccagctgtaagttcctgagctgcacccatcgatccagggttaactctcttcaa
ggtgccatgctgaccaatgaaacctcctacaacgaagacgctgaggacatggagttccgc
ctgaggacgggagaggtggtagacgataccacctaccccatggccccacacatggccagc
gaagactcccggttcaacaccttcggcccgtggccctccacatccccggtccgacctaga
gagctggcccaggcggggctcttctatctgggggagggagaccaggtgcagtgtttctgc
tgtggaaggatgctgaagggctgggaggctggggacacggcgtggggagagcactccaaa
cactacccctactgcttcttcatcctggggcatgatgtggggaacctcccctctcagagg
gggagggaggtggaggagaccaggccatgcccgggtcctcgggtccccatgcagagcttt
gaggagaggctaggcagctttgcaggaatccagcaccaccctattgaccacgagaggctg
gccagagcaggcttctacaacataggtgcaccagaccatgtgcagtgtttccactgtggt
ggaggtctgaagggctggcagcaggatgaggatccctgggaggagcacgccaaacactat
cctgggtgcagttttctactggcagagaaaggacaggagttcgtcagcagcgttcagcta
caaggtcctggccggaacaatgctgcttcaagtcacctaaatggatgttcaagtcatgag
acggaggtgctgcagtcagccaatgcccagaaggcggtggagatgggtctggagcctgcc
ttggtagagaggactatacaggagaggctacgcagggatgggacaggctactccaccctg
gaaactctgctgcaggactgctttaacagagaccctgacagcgacgcagagaaccatgac
gagggtccccttgagaagttacggaagctgcagagggagaaacagtgcaaagtgtgtatg
gacagagacatctgcatcgtcttcatcccctgtgggcacctggtcgtctgcaaggagtgt
tccgaggccctcgacaagtgtcccatctgctgttgtgccatcacacaaaagatcaagaca
tacatctcctaa
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