KEGG   Oncorhynchus mykiss (rainbow trout): 110489126
Entry
110489126         CDS       T07259                                 
Name
(RefSeq) E3 ubiquitin-protein ligase XIAP isoform X1
  KO
K04725  E3 ubiquitin-protein ligase XIAP [EC:2.3.2.27]
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy04120  Ubiquitin mediated proteolysis
omy04210  Apoptosis
omy04217  Necroptosis
omy04510  Focal adhesion
omy04621  NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:omy00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    110489126
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    110489126
   04217 Necroptosis
    110489126
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    110489126
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    110489126
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:omy01002]
    110489126
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:omy04121]
    110489126
   03029 Mitochondrial biogenesis [BR:omy03029]
    110489126
Enzymes [BR:omy01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     110489126
Peptidases and inhibitors [BR:omy01002]
 Peptidase inhibitors
  Family I32: IAP family
   110489126
Ubiquitin system [BR:omy04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    110489126
Mitochondrial biogenesis [BR:omy03029]
 Mitochondrial quality control factors
  Mitochondrial dynamics
   Retention of mitochondria
    110489126
SSDB
Motif
Pfam: BIR zf-C3HC4_3 UBA_BIRC2-3 Prok-RING_4
Other DBs
NCBI-GeneID: 110489126
NCBI-ProteinID: XP_021417384
Ensembl: ENSOMYG00000019258
UniProt: A0A8C7QPL3
LinkDB
Position
14:31326015..31332941
AA seq 463 aa
MSGPGRDGDMESDHAVDWSMMDMRLDSFRGSLLAQQVSAERLARAGFYFTGQADKVRCFS
CHKTVENWCGGDAPVERHAEVSPSCKFLSCTHRSRVNSLQGAMLTNETSYNEDAEDMEFR
LRTGEVVDDTTYPMAPHMASEDSRFNTFGPWPSTSPVRPRELAQAGLFYLGEGDQVQCFC
CGRMLKGWEAGDTAWGEHSKHYPYCFFILGHDVGNLPSQRGREVEETRPCPGPRVPMQSF
EERLGSFAGIQHHPIDHERLARAGFYNIGAPDHVQCFHCGGGLKGWQQDEDPWEEHAKHY
PGCSFLLAEKGQEFVSSVQLQGPGRNNAASSHLNGCSSHETEVLQSANAQKAVEMGLEPA
LVERTIQERLRRDGTGYSTLETLLQDCFNRDPDSDAENHDEGPLEKLRKLQREKQCKVCM
DRDICIVFIPCGHLVVCKECSEALDKCPICCCAITQKIKTYIS
NT seq 1392 nt   +upstreamnt  +downstreamnt
atgtcaggccccgggagagacggtgatatggagtcagaccacgcagtagactggtccatg
atggacatgcggctggactcattccggggttccctcctggcccagcaggtgtcagcggag
aggctggcccgcgcagggttctacttcacgggacaggccgacaaggtgcgctgcttcagt
tgccacaagactgtagagaactggtgtggaggtgacgcacccgtggagaggcacgcggag
gtctcccccagctgtaagttcctgagctgcacccatcgatccagggttaactctcttcaa
ggtgccatgctgaccaatgaaacctcctacaacgaagacgctgaggacatggagttccgc
ctgaggacgggagaggtggtagacgataccacctaccccatggccccacacatggccagc
gaagactcccggttcaacaccttcggcccgtggccctccacatccccggtccgacctaga
gagctggcccaggcggggctcttctatctgggggagggagaccaggtgcagtgtttctgc
tgtggaaggatgctgaagggctgggaggctggggacacggcgtggggagagcactccaaa
cactacccctactgcttcttcatcctggggcatgatgtggggaacctcccctctcagagg
gggagggaggtggaggagaccaggccatgcccgggtcctcgggtccccatgcagagcttt
gaggagaggctaggcagctttgcaggaatccagcaccaccctattgaccacgagaggctg
gccagagcaggcttctacaacataggtgcaccagaccatgtgcagtgtttccactgtggt
ggaggtctgaagggctggcagcaggatgaggatccctgggaggagcacgccaaacactat
cctgggtgcagttttctactggcagagaaaggacaggagttcgtcagcagcgttcagcta
caaggtcctggccggaacaatgctgcttcaagtcacctaaatggatgttcaagtcatgag
acggaggtgctgcagtcagccaatgcccagaaggcggtggagatgggtctggagcctgcc
ttggtagagaggactatacaggagaggctacgcagggatgggacaggctactccaccctg
gaaactctgctgcaggactgctttaacagagaccctgacagcgacgcagagaaccatgac
gagggtccccttgagaagttacggaagctgcagagggagaaacagtgcaaagtgtgtatg
gacagagacatctgcatcgtcttcatcccctgtgggcacctggtcgtctgcaaggagtgt
tccgaggccctcgacaagtgtcccatctgctgttgtgccatcacacaaaagatcaagaca
tacatctcctaa

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